Parental gene:

NDFIP1, ENSPTRG00000017358

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:5:142867581..142913552(+)


>ENSPTRG00000017358
ATGGCGTTGGCGTTGGCGGCGCTGGCGGCGGTCGAGCCGGCCTGCGGCAGCCGGTACCAGCAGTTGCAGAATGAAGAAGA
GTCTGGAGAACCTGAACAGGCTGCAGGTGATGCTCCTCCACCTTACAGCAGCATTTCTGCAGAGAGCACAGCATATTTTG
ACTACAAGGATGAGTCTGGGTTTCCAAAGCCCCCATCTTACAATGTAGCTACAACACTGCCCAGTTATGATGAAGCGGAG
AGGACCAAGGCTGAAGCTACTATCCCTTTGGTTCCTGGGAGAGATGAGGATTTTGTGGGTCGGGATGATTTTGATGATGC
TGACCAGCTGAGGATAGGAAATGATGGGATTTTCATGTTAACTTTTTTCATGGCATTCCTCTTTAACTGGATTGGGTTTT
TCCTGTCTTTTTGCCTGACCACTTCAGCTGCAGGAAGGTATGGGGCCATTTCAGGATTTGGTCTCTCTCTAATTAAATGG
ATCCTGATTGTCAGGTTTTCCACCTATTTCCCTGGATATTTTGATGGTCAGTACTGGCTCTGGTGGGTGTTCCTTGTTTT
AGGCTTTCTCCTGTTTCTCAGAGGATTTATCAATTATGCAAAAGTTCGGAAGATGCCAGAAACTTTCTCAAATCTCCCCA
GGACCAGAGTTCTCTTTATTTATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 247 .67 RPM
SRP007412_cerebellum 165 .55 RPM
SRP007412_heart 70 .83 RPM
SRP007412_kidney 119 .88 RPM
SRP007412_liver 68 .81 RPM
SRP007412_testis 92 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000047747 ortholog_one2one 1 retrogene
retro_btau_766,
Callithrix jacchus ENSCJAG00000018271 ortholog_one2one 1 retrogene
retro_cjac_3175,
Equus caballus ENSECAG00000021907 ortholog_one2one 1 retrogene
retro_ecab_261,
Homo sapiens ENSG00000131507 ortholog_one2one 1 retrogene
retro_hsap_1091,
Gorilla gorilla ENSGGOG00000004879 ortholog_one2one 1 retrogene
retro_ggor_859,
Macaca mulatta ENSMMUG00000016787 ortholog_one2one 1 retrogene
retro_mmul_846,
Pongo abelii ENSPPYG00000015896 ortholog_one2one 1 retrogene
retro_pabe_908,
Sarcophilus harrisii ENSSHAG00000002466 ortholog_one2one 1 retrogene
retro_shar_738,
Sus scrofa ENSSSCG00000025295 ortholog_one2many 1 retrogene
retro_sscr_301,
Ictidomys tridecemlineatus ENSSTOG00000005153 ortholog_one2one 1 retrogene
retro_itri_1454,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_743 66.96 51.13
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Download FASTA sequences of all ENSPTRG00000017358 retrocopies