Parental gene:

EIF5A2, ENSPTRG00000015621

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:3:174709718..174727235(-)


>ENSPTRG00000015621
ATGGCAGACGAAATTGATTTCACTACTGGAGATGCCGGGGCTTCCAGCACTTACCCTATGCAGTGCTCGGCCTTGCGCAA
AAACGGCTTCGTGGTGCTCAAAGGACGACCATGCAAAATAGTGGAGATGTCAACTTCCAAAACTGGAAAGCATGGTCATG
CCAAGGTTCACCTTGTTGGAATTGATATTTTCACGGGCAAAAAATATGAAGATATTTGTCCTTCTACTCACAACATGGAT
GTTCCAAATATTAAGAGAAATGATTATCAACTGATATGCATTCAAGATGGTTACCTTTCCCTGCTGACAGAAACTGGTGA
AGTTCGTGAGGATCTTAAACTGCCAGAAGGTGAACTAGGCAAAGAAATAGAGGGAAAATACAATGCAGGTGAAGATGTAC
AGGTGTCTGTCATGTGTGCAATGAGTGAAGAATATGCTGTAGCCATAAAACCCTGCAAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 9 .21 RPM
SRP007412_cerebellum 5 .27 RPM
SRP007412_heart 4 .63 RPM
SRP007412_kidney 7 .69 RPM
SRP007412_liver 3 .50 RPM
SRP007412_testis 10 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005363 ortholog_one2one 1 retrogene
retro_chof_1016,
Cavia porcellus ENSCPOG00000012594 ortholog_one2one 1 retrogene
retro_cpor_1060,
Dasypus novemcinctus ENSDNOG00000014801 ortholog_one2one 2 retrogenes
retro_dnov_1133, retro_dnov_268,
Homo sapiens ENSG00000163577 ortholog_one2one 1 retrogene
retro_hsap_1591,
Loxodonta africana ENSLAFG00000013225 ortholog_one2one 1 retrogene
retro_lafr_901,
Macropus eugenii ENSMEUG00000007473 ortholog_one2one 2 retrogenes
retro_meug_1619, retro_meug_641,
Macaca mulatta ENSMMUG00000022880 ortholog_one2one 1 retrogene
retro_mmul_2222,
Nomascus leucogenys ENSNLEG00000005292 ortholog_one2one 1 retrogene
retro_nleu_1762,
Oryctolagus cuniculus ENSOCUG00000016657 ortholog_one2many 1 retrogene
retro_ocun_65,
Pongo abelii ENSPPYG00000014294 ortholog_one2one 2 retrogenes
retro_pabe_1308, retro_pabe_1640,
Pan troglodytes ENSPTRG00000008674 within_species_paralog 3 retrogenes
retro_ptro_1198, retro_ptro_442, retro_ptro_504,
Ictidomys tridecemlineatus ENSSTOG00000008130 ortholog_one2one 2 retrogenes
retro_itri_1400, retro_itri_689,
Tupaia belangeri ENSTBEG00000000408 ortholog_one2one 2 retrogenes
retro_tbel_1442, retro_tbel_4419,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1070 80.52 100.00
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Download FASTA sequences of all ENSPTRG00000015621 retrocopies