Parental gene:

SLC35C2, ENSPTRG00000013582

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:20:43351865..43366382(-)


>ENSPTRG00000013582
ATGGGGAGGTGGGCCCTCGATGTGGCCTTTTTGTGGAAGGCGGTGTTGACCCTGGGGCTGGTGCTTCTCTACTACTGCTT
CTCCATCGGCATCACCTTCTACAACAAATGGCTGACAAAGAGCTTCCATTTCCCCCTCTTCATGACGATGCTGCACCTGG
CCGTGATCTTCCTCTTCTCCGCCCTGTCCAGGGCGCTGGTTCAGTGCTCCAGCCACAGGGCCCGTGTGGTGCTGAGCTGG
GCCGACTACCTCAGAAGAGTGGCTCCCACAGCTCTGGCGACGGCGCTTGACGTGGGCTTGTCCAACTGGAGCTTCCTCTA
TGTCACCGTCTCGCTGTACACAATGACCAAATCCTCAGCTGTCCTCTTCATCTTGATCTTCTCTCTGATCTTCAAGCTGG
AGGAGCTGCGCGCGGCACTGGTCCTGGTGGTCCTCCTCATCGCCGGGGGTCTCTTCATGTTCACCTACAAGTCCACACAG
TTCAACGTGGAGGGCTTCGCCTTGGTGCTGGGGGCCTCGTTCATCGGTGGCATTCGCTGGACCCTCACCCAGATGCTCCT
GCAGAAGGCTGAACTCGGCCTCCAGAATCCCATCGACACCATGTTCCACCTGCAGCCACTCATGTTCCTGGGGCTCTTCC
CTCTCTTTGCTGTATTTGAAGGTCTCCATTTGTCCACATCTGAGAAAATCTTCCGTTTCCAGGACACAGGGCTGCTCCTG
CGGGTACTTGGGAGCCTCTTCCTTGGCGGGATTCTCGCCTTTGGTTTGGGCTTCTCTGAGTTCCTCCTGGTCTCCAGAAC
CTCCAGCCTCACTCTCTCCATTGCTGGCATTTTTAAGGAAGTCTGCACTTTGCTGTTGGCAGCTCATCTGCTGGGCGATC
AGATCAGCCTCCTGAACTGGCTGGGCTTCGCCCTCTGCCTCTCGGGAATATCCCTCCATGTTGCCCTCAAAGCCCTGCAT
TCCAGAGGTGATGGTGGCCCCAAGGCCTTGAAGGGGCTGGGCTCCAGCCCCGACCTGGAGCTGCTGCTCCGGAGCAGCCA
GCGGGAGGAAGGTGACAATGAGGAGGAGGAGTACTTTGTGGCCCAGGGGCAGCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 32 .05 RPM
SRP007412_cerebellum 30 .01 RPM
SRP007412_heart 8 .60 RPM
SRP007412_kidney 40 .43 RPM
SRP007412_liver 49 .26 RPM
SRP007412_testis 16 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011583 ortholog_one2one 2 retrogenes
retro_chof_2686, retro_chof_952,
Callithrix jacchus ENSCJAG00000017091 ortholog_one2one 1 retrogene
retro_cjac_4140,
Homo sapiens ENSG00000080189 ortholog_one2one 1 retrogene
retro_hsap_4789,
Gorilla gorilla ENSGGOG00000014052 ortholog_one2one 1 retrogene
retro_ggor_2982,
Nomascus leucogenys ENSNLEG00000006880 ortholog_one2one 1 retrogene
retro_nleu_1104,
Pongo abelii ENSPPYG00000011091 ortholog_one2one 1 retrogene
retro_pabe_3726,
Tupaia belangeri ENSTBEG00000005486 ortholog_one2one 1 retrogene
retro_tbel_531,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3186 77.72 54.52
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Download FASTA sequences of all ENSPTRG00000013582 retrocopies