Parental gene:

NSFL1C, ENSPTRG00000013164

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:20:1354736..1380308(-)


>ENSPTRG00000013164
ATGGCGGCGGAGCGACAGGAGGCGCTGAGGGAGTTCGTGGCGGTGACGGGCGCCGAGGAGGACCGGGCCCGCTTCTTTCT
CGAGTCGGCCGGCTGGGACTTGCAGATCGCGCTAGCGAGCTTTTATGAGGACGGAGGGGATGAAGACATTGTGACCATTT
CGCAGGCAACCCCCAGTTCAGTGTCCAGAGGCACAGCCCCCAGTGATAATAGAGTGACATCCTTCAGAGACCTCATTCAT
GACCAAGATGAAGATGAGGAGGAGGAGGAAGGCCAGAGGTTTTATGCTGGGGGCTCAGAGAGAAGTGGACAGCAGATTGT
TGGCCCTCCCAGGAAGAAAAGTCCCAACGAGCTGGTGGATGATCTCTTTAAAGGTGCCAAAGAGCATGGAGCTGTAGCTG
TGGAGCGAGTGACCAAGAGCCCTGGAGAGACCAGTAAACCGAGACCATTTGCAGGAGGTGGCTACCGCCTTGGGGCAGCA
CCAGAGGAAGAGTCTGCCTATGTGGCAGGAGAAAAGAGGCAGCATTCCAGCCAAGATGTTCATGTAGTATTGAAACTCTG
GAAGAGTGGATTCAGCCTGGATAATGGAGAACTCAGAAGCTACCAAGACCCATCCAATGCCCAGTTTCTGGAGTCTATCC
GCAGAGGGGAGGTGCCAGCAGAGCTTCGGAGGCTAGCTCACGGTGGACAGGTGAACTTGGATATGGAGGACCATCGGGAC
GAGGACTTTGTGAAGCCCAAAGGAGCCTTCAAAGCCTTCACTGGCGAGGGTCAGAAACTGGGCAGCACTGCCCCCCAGGT
GTTGAGTACCAGCTCTCCAGCCCAACAGGCAGAAAATGAAGCCAAAGCCAGCTCTTCCATCTTAATCGACGAATCAGAGC
CCACCACAAACATCCAAATTCGGCTTGCAGACGGCGGGAGGCTGGTGCAGAAATTTAACCACAGCCACAGGATCAGCGAC
ATCCGACTCTTCATCGTGGATGCCCGGCCAGCCATGGCTGCCACCAGCTTTATCCTCATGACTACTTTCCCGAACAAAGA
GCTGGCTGATGAGAGCCAGACCCTGAAGGAAGCCAACCTGCTCAATGCTGTCATCGTGCAGCGGTTAACATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 67 .92 RPM
SRP007412_cerebellum 64 .89 RPM
SRP007412_heart 45 .29 RPM
SRP007412_kidney 52 .51 RPM
SRP007412_liver 84 .29 RPM
SRP007412_testis 55 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000088833 ortholog_one2one 1 retrogene
retro_hsap_4050,
Gorilla gorilla ENSGGOG00000013539 ortholog_one2one 1 retrogene
retro_ggor_2718,
Macropus eugenii ENSMEUG00000003940 ortholog_one2one 2 retrogenes
retro_meug_1890, retro_meug_605,
Macaca mulatta ENSMMUG00000015994 ortholog_one2one 1 retrogene
retro_mmul_2337,
Mus musculus ENSMUSG00000027455 ortholog_one2one 1 retrogene
retro_mmus_2565,
Nomascus leucogenys ENSNLEG00000009341 ortholog_one2one 1 retrogene
retro_nleu_2800,
Otolemur garnettii ENSOGAG00000002630 ortholog_one2one 2 retrogenes
retro_ogar_1144, retro_ogar_1609,
Pongo abelii ENSPPYG00000010851 ortholog_one2one 1 retrogene
retro_pabe_3324,
Pan troglodytes ENSPTRG00000011705 within_species_paralog 1 retrogene
retro_ptro_1347,
Pan troglodytes ENSPTRG00000033886 within_species_paralog 1 retrogene
retro_ptro_2668,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2745 85.29 98.92
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Download FASTA sequences of all ENSPTRG00000013164 retrocopies