Parental gene:

Nsfl1c, ENSMUSG00000027455

Aliases:Nsfl1c, Munc-18c, Stxbp3a, p47
Description:NSFL1 (p97) cofactor (p47) [Source:MGI Symbol;Acc:MGI:3042273]
Organism:Mouse (Mus musculus)
Coordinates:2:151494181..151511414(+)


>ENSMUSG00000027455
ATGGCGGAGGAGCGGCAGGACGCGTTGAGGGAGTTCGTGGCGGTGACTGGCACTGAGGAGGACAGGGCCCGTTTCTTCCT
GGAGTCGGCTGGCTGGGACCTGCAGATTGCACTTGCAAGCTTTTATGAGGATGGAGGGGATGAAGACATTGTGACCATTT
CACAAGCAACCCCAAGTTCAGTGTCCAGAGGCACAGCTCCTAGTGATAATAGAGTGACATCCTTCAGAGACCTCATTCAT
GACCAAGATGAAGAGGAGGAGGAAGAGGAGGGACAGAGGAGCAGGTTTTATGCTGGGGGCTCAGAGAGAAGTGGACAGCA
GATTGTTGGTCCTCCCCGGAAGAAAAGTCCCAACGAGCTGGTGGATGATCTGTTTAAGGGTGCCAAAGAGCATGGGGCTG
TAGCTGTGGAACGAGTGACCAAGAGCCCTGGAGAGACCAGTAAACCGAGACCATTTGCAGGAGGGGGCTACCGCCTTGGA
GCAGCACCAGAGGAAGAGTCTGCCTATGTGGCAGGAGAAAGGAGGCGGCATTCAGGCCAGGATGTTCATGTAGTGCTAAA
GCTCTGGAAAACTGGATTCAGCCTAGACAATGGTGACCTTAGAAGCTACCAAGACCCATCCAATGCCCAGTTTCTGGAGT
CTATCCGTAGAGGGGAGGTTCCTGCAGAGCTTCGGAGGTTAGCGCATGGTGGGCAGGTGAACCTGGATATGGAGGATCAT
CGGGATGAGGACTTCGTGAAGCCCAAGGGAGCTTTCAAAGCCTTCACTGGCGAGGGCCAGAAACTGGGCAGCACGGCCCC
CCAGGTATTAAACACCAGCTCTCCAGCCCAACAAGCAGAAAATGAAGCCAAAGCTAGCTCGTCCATCTTAATCAATGAAG
CAGAACCTACCACGAACATCCAAATCCGGCTTGCAGATGGCGGGAGGCTGGTGCAGAAATTCAACCACAGCCACAGGATC
AGCGACATCCGGCTCTTCATCGTGGATGCCCGGCCAGCTATGGCTGCCACCAGTTTTGTCCTTATGACTACCTTCCCTAA
CAAAGAGCTGGCTGATGAGAACCAAACCCTGAAGGAAGCCAACCTTCTCAACGCTGTCATCGTGCAGCGGTTAACATAA

Library Parental gene expression (RPM)
SRP007412_brain 45 .25 RPM
SRP007412_cerebellum 59 .18 RPM
SRP007412_heart 48 .16 RPM
SRP007412_kidney 58 .71 RPM
SRP007412_liver 32 .66 RPM
SRP007412_testis 20 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000088833 ortholog_one2one 1 retrogene
retro_hsap_4050,
Gorilla gorilla ENSGGOG00000013539 ortholog_one2one 1 retrogene
retro_ggor_2718,
Macropus eugenii ENSMEUG00000003940 ortholog_one2one 2 retrogenes
retro_meug_1890, retro_meug_605,
Macaca mulatta ENSMMUG00000015994 ortholog_one2one 1 retrogene
retro_mmul_2337,
Mus musculus ENSMUSG00000020634 within_species_paralog 1 retrogene
retro_mmus_1007,
Nomascus leucogenys ENSNLEG00000009341 ortholog_one2one 1 retrogene
retro_nleu_2800,
Otolemur garnettii ENSOGAG00000002630 ortholog_one2one 2 retrogenes
retro_ogar_1144, retro_ogar_1609,
Pongo abelii ENSPPYG00000010851 ortholog_one2one 1 retrogene
retro_pabe_3324,
Pan troglodytes ENSPTRG00000013164 ortholog_one2one 1 retrogene
retro_ptro_2745,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2565 93.47 91.08
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Download FASTA sequences of all ENSMUSG00000027455 retrocopies