Parental gene:

RDH13, ENSPTRG00000011484

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:19:59956417..59976491(-)


>ENSPTRG00000011484
ATGAGCCGCTACCTGCTGCCGCTGTCGGCGCTGGGCACGGTAGCAGGCGCCGCCGTGCTGCTCAAGGACTATGTCACCGG
TGGGGCTTGCCCCAGCAAGGCCACCATCCCTGGGAAGACGGTCATCGTGACGGGCGCCAACACAGGCATCGGGAAGCAGA
CCGCCTTGGAACTGGCCAGGAGAGGAGGCAACATCATCCTGGCCTGCCGAGACATGGAGAAGTGTGAGGCGGCAGCAAAG
GACATCCGCGGGGAGACCCTCAATCACCATGTCAACGCCCGGCACCTGGACTTGGCTTCCCTCAAGTCTATCCGAGAGTT
TGCAGCAAAGATCATTGAAGAGGAGGAGCGAGTGGACATTCTAATCAACAACGCGGGTGTGATGCGGTGCCCCCACTGGA
CCACCGAGGACGGCTTCGAGATGCAGTTTGGCGTTAACCACCTGGGTCACTTTCTCTTGACAAACTTGCTGCTGGACAAG
CTGAAAGCCTCAGCCCCTTCGCGGATCATCAACCTCTCGTCCTTGGCCCATGTTGCTGGGCACATAGACTTTGATGACTT
GAACTGGCAGACGAGGAAGTATAACACCAAAGCCGCCTACTGCCAGAGCAAGCTGGCCATCGTCCTCTTCACCAAGGAGC
TGAGCCGGCGGCTGCAAGGCTCTGGTGTGACTGTCAACGCCCTGCACCCCGGCGTGGCCAGGACAGAGCTGGGCAGACAC
ACGGGCATCCATGGCTCCACCTTCTCCAGCACCACACTCGGACCCATCTTCTGGCTGCTGGTCAAGAGCCCCGAGCTGGC
CGCCCAGCCCAGCACATACCTGGCCGTGGCGGAGGAACTGGCGGATGTTTCCGGAAAGTACTTCGATGGACTCAAACAGA
AGGCCCCGGCCCCCGAGGCTGAGGATGAGGAGGTGGCCCAGAGGCTTTGGGCTGAAAGTGCCCGCCTGGTGGGCTTAGAG
GCTCCCTCTGTGAGGGAGCAGCCCCTCCCCAGATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 8 .60 RPM
SRP007412_cerebellum 10 .43 RPM
SRP007412_heart 8 .63 RPM
SRP007412_kidney 17 .78 RPM
SRP007412_liver 7 .17 RPM
SRP007412_testis 5 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003306 ortholog_one2one 1 retrogene
retro_amel_114,
Equus caballus ENSECAG00000023146 ortholog_one2one 1 retrogene
retro_ecab_338,
Ochotona princeps ENSOPRG00000015998 ortholog_one2one 2 retrogenes
retro_opri_286, retro_opri_524,
Petromyzon marinus ENSPMAG00000009095 ortholog_one2one 1 retrogene
retro_pmar_3,
Pongo abelii ENSPPYG00000010398 ortholog_one2one 1 retrogene
retro_pabe_1972,
Sorex araneus ENSSARG00000003600 ortholog_one2one 1 retrogene
retro_sara_314,
Tupaia belangeri ENSTBEG00000016531 ortholog_one2one 1 retrogene
retro_tbel_1570,
Drosophila melanogaster FBgn0033203 ortholog_many2many 1 retrogene
retro_dmel_79,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1576 54.33 62.84
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Download FASTA sequences of all ENSPTRG00000011484 retrocopies