Parental gene:

RDH13, ENSPPYG00000010398

Aliases:None
Description:retinol dehydrogenase 13 (all-trans/9-cis) [Source:HGNC Symbol;Acc:19978]
Organism:Orangutan (Pongo abelii)
Coordinates:19:56904065..56928826(-)


>ENSPPYG00000010398
ATGAGCCGGTACCTGCTGCCGCTGTCGGCGCTGGGCACGGTAGCAGGCGCCGCCGTGCTGCTCAAGGACTATGTCACCGG
TGGGGCTTGCCCCAGCAAGGCCACCATCCCTGGGAAGACGGTCATCGTGACGGGCGCCAACACAGGCATCGGGAAGCAGA
CGGCCTTGGAACTGGCCAGGAGAGGAGGCAACATCATCCTGGCCTGCCGAGACATGGAGAAGTGTGAGGCGGCGGCAAAG
GACATCCGCGGGGAGACCCTCAATCACCACGTCAACGCCCGGCACCTGGACTTGGCTTCCCTCCAGTCCATCCGAGAGTT
TGCAGCAAAGATCATTGAAGAGGAGGAGCGAGTGGACATTCTAATCAACAACGCAGGTGTGATGCGGTGTCCCCACTGGA
TCACCGAGGACGGCTTCGAGATGCAGTTTGGCGTTAACCACCTGGGTCACTTTCTCTTGACAAACTTGCTGCTGAACAAG
CTGAAAGCCTCAGCCCCTTCGCGGATCATCAACCTCTCGTCCTTGGCCCATGTTGCTGGGCACATAGACTTTGATGACTT
GAACTGGCAGACGAGGAAGTATAACACCAAAGCCGCCTACTGCCAGAGCAAGCTGGCCATCGTCCTCTTCACCAAGGAGC
TGAGCCGGCGGCTGCAAGGTTCTGGTGTGACTGTCAATGCCCTGCACCCCGGCGTGGCCAGGACAGAGCTGGGCAGACAC
ACGGGCATCCATGGCTCCACCTTCTCCAGCACCACACTCGGGCCCATCTTCTGGCTGCTGGTCAAGAGCCCCGAGCTGGC
TGCCCAGCCCAGCACATACCTGGCCGTGGCGGAGGAACTGGCAGATGTTTCGGGAAAGTATTTCGATGGACTCAAACAGA
AGGCCCCGGCCCCCGAGGCTGAGGATGAGGAGGTGGCCCGGAGGCTTTGGGCTGAAAGTGCCCGCCTGGTGGGCTTAGAG
GCTCCCTCTGTGAGGGAGCAGCCCCTCCCCAGATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .21 RPM
SRP007412_cerebellum 2 .92 RPM
SRP007412_heart 1 .87 RPM
SRP007412_kidney 3 .51 RPM
SRP007412_liver 2 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003306 ortholog_one2one 1 retrogene
retro_amel_114,
Equus caballus ENSECAG00000023146 ortholog_one2one 1 retrogene
retro_ecab_338,
Ochotona princeps ENSOPRG00000015998 ortholog_one2one 2 retrogenes
retro_opri_286, retro_opri_524,
Petromyzon marinus ENSPMAG00000009095 ortholog_one2one 1 retrogene
retro_pmar_3,
Pan troglodytes ENSPTRG00000011484 ortholog_one2one 1 retrogene
retro_ptro_1576,
Sorex araneus ENSSARG00000003600 ortholog_one2one 1 retrogene
retro_sara_314,
Tupaia belangeri ENSTBEG00000016531 ortholog_one2one 1 retrogene
retro_tbel_1570,
Drosophila melanogaster FBgn0033203 ortholog_many2many 1 retrogene
retro_dmel_79,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1972 54.81 62.84
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000010398 retrocopies