Parental gene:

ENSPTRG00000011126

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:19:50082470..50092977(+)


>ENSPTRG00000011126
ATGGGGAACGTGTTGGCTGCCAGCTCGCCGCCCGCAGGACCGCCACCGCCGCCTGCGCCGGCCCTCGTGGGGCTGCCGCC
ACCTCCGCCCTCGCCGCCGGGCTTCACGCTGCCGCCGCTGGGAGGCAGCCTGGGCGCCGGCACCAGTACGAGTCGAGGTT
CGGAACGGACCCCCGGGGCTGCAACCGCCAGCGCCTCAGGGGCCGCCGAGGATGGGGCATGCGGCTGCCTGCCCAACCCG
GGCACATTCGAGGAGTGCCACCGGAAGTGCAAGGAGCTGTTTCCCATTCAGATGGAGGGTGTCAAGCTCACAGTCAACAA
AGGGTTGAGTAACCATTTCCAGGTGAACCACACAGTAGCCCTCAGCACAATCGGGGAGTCCAACTACCACTTCGGGGTCA
CATATGTGGGGACAAAGCAGCTGAGTCCCACAGAGGCGTTCCCTGTACTGGTGGGTGACATGGACAACAGTGGCAGTCTC
AACGCTCAGGTCATTCACCAGCTGGGCCCCGGTCTCAGGTCCAAGATGGCCATCCAGACCCAGCAGTCGAAGTTTGTGAA
CTGGCAGGTGGACGGGGAGTATCGGGGCTCTGACTTCACAGCAGCCGTCACCCTGGGGAACCCAGACGTCCTCGTGGGTT
CAGGACTGCAGGTGGGTGTGGAGTTTGAGGCCAGCACAAGGATGCAGGACACCAGCGTCTCCTTCGGGTACCAGCTGGAC
CTGCCCAAGGCCAACCTCCTCTTCAAAGGCTCTGTGGATAGCAACTGGATCGTGGGTGCCACGCTGGAGAAGAAGCTCCC
GCCCCTGCCCCTGACACTGGCCCTTGGGGCCTTCCTGAATCACCGCAAGAACAAGTTCCAGTGTGGCTTTGGCCTCACCA
TCGGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 20 .29 RPM
SRP007412_cerebellum 12 .08 RPM
SRP007412_heart 5 .80 RPM
SRP007412_kidney 13 .21 RPM
SRP007412_liver 15 .42 RPM
SRP007412_testis 3 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000130204 ortholog_one2many 5 retrogenes
retro_hsap_1300, retro_hsap_1386, retro_hsap_2321, retro_hsap_2537, retro_hsap_3159,
Gorilla gorilla ENSGGOG00000023033 ortholog_one2many 1 retrogene
retro_ggor_1356,
Microcebus murinus ENSMICG00000014041 ortholog_one2many 1 retrogene
retro_mmur_420,
Myotis lucifugus ENSMLUG00000028928 ortholog_one2many 1 retrogene
retro_mluc_697,
Macaca mulatta ENSMMUG00000014303 possible_ortholog 1 retrogene
retro_mmul_1998,
Nomascus leucogenys ENSNLEG00000001726 ortholog_one2many 2 retrogenes
retro_nleu_2368, retro_nleu_2542,
Oryctolagus cuniculus ENSOCUG00000023582 ortholog_one2many 1 retrogene
retro_ocun_1143,
Pongo abelii ENSPPYG00000025858 ortholog_many2many 1 retrogene
retro_pabe_174,
Ictidomys tridecemlineatus ENSSTOG00000009019 ortholog_many2many 1 retrogene
retro_itri_150,
Drosophila melanogaster FBgn0016041 ortholog_many2many 1 retrogene
retro_dmel_74,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_39 88.50 76.61
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Download FASTA sequences of all ENSPTRG00000011126 retrocopies