Parental gene:

ENSPPYG00000025858

Aliases:None
Description:None
Organism:Orangutan (Pongo abelii)
Coordinates:19:46130190..46143430(+)


>ENSPPYG00000025858
ATGGGGAACGTGTTGGCCGCCAGCTCGCCGCCCGCAGGGCCGCCACCGCCGCCTGCGCCGGCCCTCGTGGGGCTGCCGCC
ACCTCCAGCCTCGCCGCCGGGCTTCACGCTGCCGCCGCTGGGAGGCTATCGGGGCGCCGGCACCAGTACGAGTCGAGGTT
CGGAACGGACCCCCGGGGCTGCAACCGCCAGCACCTCAGGGGCCGCCGAGGATGGGGCCTGCGGCTGCCTGCCCAACCCG
GGCACGTTCGAGGAGTGCCACGGGAAGTGCAAGGAGCTGTTTCCCATTCAGATGGAGGGTGTCAAGCTCACAGTCAACAA
AGGGTTGAGTAACCATTTCCAGGTGAACCACACAGTAGCCCTCAGCACAATCGGGGAGTCCAACTACCACTTCGGGGTCA
CGTATGTGGGGACAAAGCAGCTAAGTCCCACAGAGGCGTTCCCTGTACTGGTGGGTGACATGGACAACAGTGGCAGTCTC
AACGCTCAGGTCATTCACCAGCTGGGCCCCGGTCTCAGGTCCAAGATGGCCATCCAGACCCAGCAGTCGAAGTTTGTGAA
CTGGCAGGTGGACGGCGAGTATCGGGGCTCTGACTTCACAGTAGCCGTCACCCTGGGGAACCCAGATGTCCTCGTGGGTT
CAGGAATCCTCGTAGCCCACTACCTCCAGAGCATCACGCCTTGCCTGGCCCTGGGCGGAGAGCTGGTCTACCACCGGCGG
CCTGGAGAGGAGGGCACTGTCATGTCTCTAGCTGGGAAATACACACTGAACAACTGGTTGGCAACGGTAACGTTGGGCCA
GGCGGGCATGCACGCAACGTACTACCACAAAGCCAGTGACCAGCTGCAGGTGGGTGTGGAGTTTGAGGCCAGCACAAGGA
TGCAGGACACCAGCGTCTCCTTCGGGTACCAGCTGGACCTGCCTAAGGCCAACCTCCTCTTCAAAGGCTCTGTGGATAGC
AACTGGATCGTGGGTGCCACGCTGGAGAAGAAGCTCCCGCCCCTGCCCCTGACACTGGCCCTTGGGGCCTTCCTGAATCA
CCGCAAGAACAAGTTCCAGTGTGGCTTTGGCCTCACCATCGGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 17 .08 RPM
SRP007412_cerebellum 9 .97 RPM
SRP007412_heart 3 .85 RPM
SRP007412_kidney 14 .62 RPM
SRP007412_liver 9 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000023033 ortholog_one2one 1 retrogene
retro_ggor_1356,
Microcebus murinus ENSMICG00000014041 ortholog_one2many 1 retrogene
retro_mmur_420,
Myotis lucifugus ENSMLUG00000028928 ortholog_one2many 1 retrogene
retro_mluc_697,
Macaca mulatta ENSMMUG00000014303 possible_ortholog 1 retrogene
retro_mmul_1998,
Nomascus leucogenys ENSNLEG00000001726 ortholog_one2many 2 retrogenes
retro_nleu_2368, retro_nleu_2542,
Oryctolagus cuniculus ENSOCUG00000023582 ortholog_one2many 1 retrogene
retro_ocun_1143,
Pan troglodytes ENSPTRG00000011126 ortholog_many2many 1 retrogene
retro_ptro_39,
Ictidomys tridecemlineatus ENSSTOG00000009019 ortholog_many2many 1 retrogene
retro_itri_150,
Drosophila melanogaster FBgn0016041 ortholog_many2many 1 retrogene
retro_dmel_74,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_174 96.68 100.00
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Download FASTA sequences of all ENSPPYG00000025858 retrocopies