Parental gene:

SLC25A39, ENSPTRG00000009272

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:17:13107803..13111749(+)


>ENSPTRG00000009272
ATGGCTGACCAGGACCCTGCGGGCATCAGCCCCCTCCAGCAAATGGTGGCCTCAGGCGCCGGGGCTGTGGTTACCTCTCT
CTTCATGACACCCCTGGACGTGGTGAAGGTTCGCCTGCAGTCTCAGCGGCCCTCCATGGCCAGCGAGCTGATGCCTTCCT
CCAGACTGTGGAGCCTCTCCTATACCAAATTGCCCTTCTCTCTCCAATCCACAGGGAAGTGCCTCCTGTACTGCAATGGT
GTCCTGGAGCCTCTGTACCTGTGCCCAAATGGTGCCCGCTGTGCCACCTGGTTTCAAGACCCTACCCGCTTCACTGGCAC
CATGGATGCCTTCGTGAAGATCGTGAGGCACGAGGGCACCAGGACCCTCTGGAGCGGCCTCCCCGCCACCCTGGTGATGA
CTGTGCCAGCTACCGCCATCTACTTCACTGCCTATGACCAACTGAAGGCCTTCCTGTGTGGTCGAGCCCTGACCTCTGAC
CTCTACGCACCCATGGTGGCTGGCGCGCTGGCCCGCCTGGGCACCGTGACTGTGATCAGCCCCCTGGAGCTTATGCGGAC
AAAGCTGCAGGCTCAGCATGTGTCGTACCGGGAGCTGGGTGCCTGTGTTCGAACTGCAGTGGCTCAGGGTGGCTGGCGCT
CACTGTGGCTGGGCTGGGGCCCCACTGCCCTTCGAGATGTGCCCTTCTCAGCCCTGTACTGGTTCAACTATGAGCTGGTG
AAGAGCTGGCTCAATGGGCTCAGGCCGAAGGACCAGACTTCTGTGGGCATGAGCTTTGTGGCTGGTGGCATCTCAGGGAC
GGTGGCTGCAGTGCTGACTCTACCCTTTGACGTGGTAAAGACCCAACGCCAGGTCGCTCTGGGAGCAATGGAGGCTGTGA
GAGTGAACCCCCTGCATGTGGACTCCACCTGGCTGCTGCTGCAGAGGATCCGGGCCGAGTCGGGCACCAAGGGACTCTTT
GCAGGCTTCCTTCCTCGGATCATCAAGGCTGCCCCCTCCTGTGCCATCATGATCAGCACCTATGAGTTCGGCAAAAGCTT
CTTCCAGAGGCTGAACCAGGACCGGCTTCTGGGCGGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 47 .56 RPM
SRP007412_cerebellum 20 .90 RPM
SRP007412_heart 11 .75 RPM
SRP007412_kidney 213 .32 RPM
SRP007412_liver 94 .70 RPM
SRP007412_testis 59 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000008556 ortholog_one2one 1 retrogene
retro_dnov_1866,
Echinops telfairi ENSETEG00000002713 ortholog_one2many 1 retrogene
retro_etel_823,
Homo sapiens ENSG00000013306 ortholog_one2one 1 retrogene
retro_hsap_290,
Myotis lucifugus ENSMLUG00000001925 ortholog_one2many 2 retrogenes
retro_mluc_2296, retro_mluc_646,
Monodelphis domestica ENSMODG00000011561 ortholog_one2one 1 retrogene
retro_mdom_1102,
Pongo abelii ENSPPYG00000008333 ortholog_one2one 1 retrogene
retro_pabe_383,
Rattus norvegicus ENSRNOG00000020994 ortholog_one2many 2 retrogenes
retro_rnor_1892, retro_rnor_2884,
Ictidomys tridecemlineatus ENSSTOG00000004189 ortholog_one2one 1 retrogene
retro_itri_447,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_239 61.72 60.12
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Download FASTA sequences of all ENSPTRG00000009272 retrocopies