Parental gene:

SLC25A39, ENSDNOG00000008556

Aliases:None
Description:solute carrier family 25, member 39 [Source:HGNC Symbol;Acc:24279]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_151:3183..6161(-)


>ENSDNOG00000008556
ATGAATGACCAGGACCGAGGGGGCATTAGCCCCCTCCAACAAATGGTGGCCTCAGGGGCTGGGGCAGTGGTCACCTCCCT
CTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCGATGCCTCCTT
CCAGCACATTAAGGAGCTTCTCATACACCAAATGGTCCTCCTCTTTCCGATCCACAGGGAAGTGCCTCCTTTACTGCAAC
GGTGTCCTGGAGCCCTTGTACCTGTGCCCGCACGGTGCCCGCTGTGCCACCTGGTTTCAGGACCCCACCCGCTTCACTGG
CACCGTGGACGCCTTTGTGAAGATCGTGAGGCACGAGGGCACCCGGACCCTGTGGAGCGGCCTTCCGGCCACCCTAGTGA
TGACCGTGCCAGCCACCGCTGCCTACTTCACTGTGTACGACCAACTCAGGGCCTTCCTGTGCAGCCGAGCACTGACCTCT
GATCTCTACGCGCCCATGGTGGCTGGCGCACTGGCCCGCCTGGCCACTGTGACCGTGATCAGCCCCTTGGAGCTGGTGCG
GACAAAGCTGCAGGCTCAGCATCTGTCGTACCGTGAGCTGGGCACCTGTGTCCGGGCTGCAGTGACTCAGAGTGACCGTT
CCCTGTGGCTGGGCTGGGGCCCCACTGCCATGCGAGATGTGCCCTTTTCAGCTTTGTACTGGTTCAACTATGAACTGGTG
AAGCGCTGGCTGAGTGGGCTCAGGTCAAAAGATGAGACGCTTGTGGGCATCAGCTTTTTGGCTGGCGGCATCTCAGGGAT
GGTGGCAGCCATCCTGACTCTGCCCTTCGATGTGGTGAAGACTCAACGCCAGATGGCACTGGGGACAGTGGAGGCTGTGC
GAGTGACACCCCCACGTGCCGACTCCACCTGGCTGCTGCTGCGGAGGATCCGGGCTGAGTCGGGCACCAGGGGCCTCTTC
GCAGGCTTTCTGCCAAGGATCATCAAGGTCGCTCTCTCCTGTGTCATCATGATCAGCACTTATGAGTTCGGCAAAGGC

Library Parental gene expression (RPM)
SRP012922_ascending_colon 136 .71 RPM
SRP012922_cerebellum 27 .08 RPM
SRP012922_heart 41 .77 RPM
SRP012922_kidney 180 .98 RPM
SRP012922_liver 70 .75 RPM
SRP012922_lung 69 .80 RPM
SRP012922_quadricep_muscle 41 .02 RPM
SRP012922_spleen 203 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000002713 ortholog_one2many 1 retrogene
retro_etel_823,
Homo sapiens ENSG00000013306 ortholog_one2one 1 retrogene
retro_hsap_290,
Myotis lucifugus ENSMLUG00000001925 ortholog_one2many 2 retrogenes
retro_mluc_2296, retro_mluc_646,
Monodelphis domestica ENSMODG00000011561 ortholog_one2one 1 retrogene
retro_mdom_1102,
Pongo abelii ENSPPYG00000008333 ortholog_one2one 1 retrogene
retro_pabe_383,
Pan troglodytes ENSPTRG00000009272 ortholog_one2one 1 retrogene
retro_ptro_239,
Rattus norvegicus ENSRNOG00000020994 ortholog_one2many 2 retrogenes
retro_rnor_1892, retro_rnor_2884,
Ictidomys tridecemlineatus ENSSTOG00000004189 ortholog_one2one 1 retrogene
retro_itri_447,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1866 69.76 58.09
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Download FASTA sequences of all ENSDNOG00000008556 retrocopies