Parental gene:

CTDNEP1, ENSPTRG00000008668

Aliases:CTDNEP1, DULLARD
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:17:7300326..7308488(-)


>ENSPTRG00000008668
ATGATGCGGACGCAGTGTCTGCTGGGGCTGCGCACGTTCGTGGCCTTCGCCGCCAAGCTCTGGAGCTTCTTCATTTACCT
TTTGCGGAGGCAGATCCGCACGGTAATTCAGTACCAAACTGTTCGATATGATATCCTCCCCTTATCTCCTGTGTCCCGGA
ATCGGCTAGCCCAGGTGAAGAGGAAGATCCTGGTGCTGGATCTGGATGAGACACTTATTCACTCCCACCATGATGGGGTC
CTGAGGCCCACAGTCCGGCCTGGTACGCCTCCTGACTTCATCCTCAAGGTGGTAATAGACAAACATCCTGTCCGGTTTTT
TGTACATAAGAGGCCCCATGTGGATTTCTTCCTGGAAGTGGTGAGCCAGTGGTACGAGCTGGTGGTGTTTACAGCAAGCA
TGGAGATCTATGGCTCTGCTGTGGCAGATAAACTGGACAATAGCAGAAGCATTCTTAAGAGGAGATATTACAGACAGCAC
TGCACTTTGGAGTTGGGCAGCTACATCAAGGACCTCTCTGTGGTCCACAGTGACCTCTCCAGCATTGTGATCCTGGATAA
CTCCCCAGGGGCTTACAGGAGCCATCCAGACAATGCCATCCCCATCAAATCCTGGTTCAGTGACCCCAGCGACACAGCCC
TTCTCAACCTGCTCCCAATGCTGGATGCCCTCAGGTTCACCGCTGATGTTCGTTCCGTGCTGAGCCGAAACCTTCACCAA
CATCGGCTCTGGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 59 .97 RPM
SRP007412_cerebellum 37 .10 RPM
SRP007412_heart 22 .85 RPM
SRP007412_kidney 44 .33 RPM
SRP007412_liver 17 .81 RPM
SRP007412_testis 24 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019443 ortholog_one2one 1 retrogene
retro_btau_915,
Dasypus novemcinctus ENSDNOG00000013673 ortholog_one2one 2 retrogenes
retro_dnov_1802, retro_dnov_2494,
Echinops telfairi ENSETEG00000004654 ortholog_one2one 1 retrogene
retro_etel_125,
Homo sapiens ENSG00000175826 ortholog_one2one 2 retrogenes
retro_hsap_2687, retro_hsap_3188,
Gorilla gorilla ENSGGOG00000013777 ortholog_one2one 2 retrogenes
retro_ggor_1338, retro_ggor_1874,
Macaca mulatta ENSMMUG00000010547 ortholog_one2one 1 retrogene
retro_mmul_2011,
Mus musculus ENSMUSG00000018559 ortholog_one2one 1 retrogene
retro_mmus_1023,
Otolemur garnettii ENSOGAG00000004389 ortholog_one2one 1 retrogene
retro_ogar_1001,
Pongo abelii ENSPPYG00000007902 ortholog_one2one 2 retrogenes
retro_pabe_2294, retro_pabe_2645,
Drosophila melanogaster FBgn0029067 ortholog_one2many 1 retrogene
retro_dmel_18,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1814 95.51 100.00
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2. retro_ptro_2256 83.61 100.00
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Download FASTA sequences of all ENSPTRG00000008668 retrocopies