Parental gene:

KARS, ENSPTRG00000008364

Aliases:None
Description:Lysine--tRNA ligase [Source:UniProtKB/TrEMBL;Acc:H2QBJ2]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:16:75048654..75068633(-)


>ENSPTRG00000008364
ATGTTGACGCAAGCTGCTGTAAGGCTTGTTAGGGGGTCTCTGCGCAAAACCTCCTGGGCAGAGTGGGGTCACAGGGAACT
GCGACTGGGTCAACTTGCTCCTTTCACAGCGCCTCACAAGGACAAGTCATTTTCTGATCAAAGAAGTGAGCTGAAGAGAC
GCCTGAAAGCTGAGAAGAAAGTAGCAGAGAAGGAGGCCAAACAGAAAGAGCTCAGTGAGAAACAGCTAAGCCAAGCCACC
GCTGCTGCCACCAACCACACCACTGATAATGGTGTGGGTCCTGAGGAAGAGAGCGTGGACCCAAATCAATACTACAAAAT
CCGCAGTCAAGCAATTCATCAGCTGAAGGTCAATGGGGAAGACCCATACCCACACAAGTTCCATGTAGACATCTCACTCA
CTGACTTCATCCAAAAATATAGTCACCTGCAGCCTGGGGATCACCTGACTGACATCACCTTAAAGGTGGCAGGTAGGATC
CATGCCAAAAGAGCTTCTGGGGGAAAGCTCATCTTCTATGATCTTCGAGGAGAGGGGGTGAAGTTGCAAGTCATGGCCAA
TTCCAGAAATTATAAATCAGAAGAAGAATTTATTCATATTAATAACAAACTGCGTCGGGGAGACATAATTGGAGTTCAGG
GGAATCCTGGTAAAACCAAGAAGGGTGAGCTGAGCATCATTCCGTATGAGATCACACTGCTGTCTCCCTGTTTGCATATG
TTACCTCATCTTCACTTTGGCCTCAAAGACAAGGAAACAAGGTATCGCCAGAGATACTTGGACTTGATCCTGAATGACTT
TGTGAGGCAGAAATTTATCATCCGCTCTAAGATCATCACATATATAAGAAGTTTCTTGGATGAGCTGGGATTCCTAGAGA
TTGAAACTCCCATGATGAACATCATCCCAGGGGGAGCCGTGGCCAAGCCTTTCATCACTTATCACAACGAGCTGGACATG
AACTTATATATGAGAGTTGCTCCAGAACTCTATCATAAGATGCTTGTGGTTGGTGGCATCGACCGGGTTTATGAAATTGG
ACGCCAGTTCCGGAATGAGGGGATTGATTTGACGCACAATCCTGAGTTCACCACCTGTGAGTTCTACATGGCCTATGCAG
ACTATCACGATCTCATGGAAATCACGGAGAAGATGGTTTCAGGGATGGTGAAGCATATTACAGGCAGTTACAAGGTCACC
TACCACCCAGATGGCCCAGAGGGCCAAGCCTACGATGTTGACTTCACCCCACCCTTCCGGCGAATCAACATGGTAGAAGA
GCTTGAGAAAGCCCTGGGGATGAAGCTGCCAGAAACAAACCTCTTTGAAACTGAAGAAACTCGCAAAATTCTTGATGATA
TCTGTGTGGCAAAAGCTGTTGAATGCCCTCCACCTCGGACCACAGCCAGGCTCCTTGACAAGCTTGTTGGGGAGTTCCTG
GAAGTGACTTGCATCAATCCTACATTCATCTGTGATCACCCACAGATAATGAGCCCTTTGGCTAAATGGCACCGCTCTAA
AGAGGGTCTGACTGAGCGCTTTGAGCTGTTTGTCATGAAGAAAGAGATATGCAATGCCTACACTGAGCTGAATGATCCCA
TGCGGCAGCGGCAGCTTTTTGAAGAACAGGCCAAGGCCAAGGCTGCAGGTGATGATGAGGCCATGTTCATAGATGAAAAC
TTCTGTACTGCCCTGGAATATGGGCTGCCCCCCACAGCTGGCTGGGGCATGGGCATTGATCGAGTCGCCATGTTTCTCAC
GGACTCCAACAACATCAAGGAAGTACTTCTGTTTCCTGCCATGAAACCCGAAGACAAGAAGGAGAATGTAGCAACCACTG
ATACACTGGAAAGCACAACAGTTGGCACTTCTGTCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 54 .05 RPM
SRP007412_cerebellum 85 .10 RPM
SRP007412_heart 81 .81 RPM
SRP007412_kidney 106 .46 RPM
SRP007412_liver 97 .58 RPM
SRP007412_testis 195 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013447 ortholog_one2one 1 retrogene
retro_chof_2324,
Callithrix jacchus ENSCJAG00000014213 ortholog_one2one 2 retrogenes
retro_cjac_4104, retro_cjac_608,
Homo sapiens ENSG00000065427 ortholog_one2one 1 retrogene
retro_hsap_1191,
Gorilla gorilla ENSGGOG00000005515 ortholog_one2one 1 retrogene
retro_ggor_930,
Mus musculus ENSMUSG00000031948 ortholog_one2one 8 retrogenes
retro_mmus_3536, retro_mmus_3537, retro_mmus_3538, retro_mmus_3539, retro_mmus_3540, retro_mmus_3541, retro_mmus_3542, retro_mmus_3543,
Nomascus leucogenys ENSNLEG00000013072 ortholog_one2one 1 retrogene
retro_nleu_2080,
Pongo abelii ENSPPYG00000007567 ortholog_one2one 1 retrogene
retro_pabe_992,
Pteropus vampyrus ENSPVAG00000006746 ortholog_one2one 2 retrogenes
retro_pvam_1301, retro_pvam_723,
Sorex araneus ENSSARG00000011493 ortholog_one2one 1 retrogene
retro_sara_415,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3036 77.86 90.28
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Download FASTA sequences of all ENSPTRG00000008364 retrocopies