Parental gene:

ALDH1A2, ENSPTRG00000007113

Aliases:None
Description:aldehyde dehydrogenase 1 family, member A2 [Source:HGNC Symbol;Acc:15472]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:15:55295757..55408884(-)


>ENSPTRG00000007113
ATGACTTCCAGCAAGATAGAGATGCCCGGCGAGGTGAAGGCCGACCCCGCCGCCCTCATGGCGTCCCTGCACCTCCTGCC
GTCGCCCACGCCCAATCTCGAAATCAAGTACACCAAGATCTTTATAAACAACGAGTGGCAGAACTCAGAGAGTGGGAGAG
TGTTCCCTGTCTATAATCCAGCCACAGGAGAACAGGTGTGTGAAGTTCAAGAAGCAGACAAGGCAGATATAGACAAAGCA
GTGCAGGCAGCCCGCCTGGCTTTCTCTCTTGGTTCAGTGTGGAGAAGGATGGATGCTTCAGAAAGGGGACGTCTGTTGGA
TAAGCTTGCAGACTTGGTGGAACGGGACAGGGCAGTTCTTGCAACCATGGAATCCCTAAATGGTGGCAAACCATTCCTGC
AAGCTTTTTATGTGGATTTGCAGGGCGTCATCAAAACCCTTCGATATTATGCAGGCTGGGCTGATAAAATTCATGGGATG
ACCATTCCTGTAGATGGAGACTATTTTACCTTTACAAGACATGAACCCATTGGAGTGTGCGGACAGATCATCCCATGGAA
CTTCCCCCTGCTGATGTTTGCCTGGAAAATAGCTCCAGCTTTGTGCTGTGGCAATACAGTAGTTATTAAGCCAGCAGAGC
AAACACCACTCAGTGCACTCTACATGGGAGCCCTCATCAAGGAGGCTGGCTTTCCTCCCGGGGTCATCAATATTTTGCCA
GGATATGGGCCAACGGCTGGGGCAGCAATAGCTTCTCACATTGGCATAGACAAGATTGCATTCACAGGGTCTACTGAGGT
TGGAAAGCTTATCCAAGAAGCAGCTGGAAGAAGTAATTTGAAGAGAGTAACTCTGGAACTTGGAGGCAAAAGTCCTAATA
TTATTTTTGCTGATGCTGATTTGGACTATGCTGTGGAGCAGGCCCACCAGGGTGTGTTCTTCAATCAAGGTCAGTGCTGC
ACTGCAGGCTCTCGCATCTTCGTGGAGGAGTCCATCTATGAGGAGTTTGTGAGAAGAAGCGTGGAGCGGGCCAAGAGGCG
CATAGTGGGGAGTCCCTTTGACCCCACCACTGAGCAGGGTCCCCAGATTGATAAGAAACAGTACAACAAGATCTTGGAAC
TCATCCAGAGTGGTGTGGCCGAGGGCGCCAAGCTGGAATGTGGAGGCAAAGGACTGGGCCGAAAGGGGTTTTTCATTGAG
CCCACAGTGTTTTCCAACGTCACTGATGATATGCGGATTGCCAAGGAGGAGATCTTTGGCCCTGTTCAGGAAATTTTGAG
ATTTAAGACGATGGATGAAGTTATCGAAAGAGCCAATAACTCAGACTTTGGACTCGTAGCAGCTGTCTTTACTAATGACA
TCAACAAGGCCCTCACAGTGTCTTCTGCAATGCAAGCTGGGACTGTTTGGATCAATTGTTATAATGCCTTAAATGCCCAG
AGCCCCTTTGGGGGATTCAAGATGTCTGGAAATGGGAGAGAAATGGGAGAATTTGGCTTGCGGGAGTACTCAGAAGTTAA
GACGGTGACAGTAAAGATCCCCCAGAAGAACTCCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .97 RPM
SRP007412_cerebellum 1 .51 RPM
SRP007412_heart 13 .99 RPM
SRP007412_kidney 55 .91 RPM
SRP007412_liver 2 .00 RPM
SRP007412_testis 271 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006418 ortholog_one2one 1 retrogene
retro_chof_1106,
Erinaceus europaeus ENSEEUG00000012262 ortholog_one2one 1 retrogene
retro_eeur_15,
Monodelphis domestica ENSMODG00000008641 ortholog_one2one 1 retrogene
retro_mdom_254,
Sorex araneus ENSSARG00000012720 ortholog_one2one 1 retrogene
retro_sara_40,
Sarcophilus harrisii ENSSHAG00000012217 ortholog_one2one 1 retrogene
retro_shar_111,
Tarsius syrichta ENSTSYG00000004549 ortholog_one2one 1 retrogene
retro_tsyr_8,
Tursiops truncatus ENSTTRG00000002361 ortholog_one2one 1 retrogene
retro_ttru_932,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_118 66.87 96.14
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Download FASTA sequences of all ENSPTRG00000007113 retrocopies