Parental gene:

ALDH1A2, ENSEEUG00000012262

Aliases:None
Description:aldehyde dehydrogenase 1 family, member A2 [Source:HGNC Symbol;Acc:15472]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_3404:32939..68568(-)


>ENSEEUG00000012262
ATTTTTATCAACAACGAGTGGCAGAACTCAGAGAGTGGGAGAGTGTTCCCTGTCTACAATCCAGCCACCGGAGAGCAGGT
GTGTGAAGTTCAGGAAGCAGACAAGGCAGATATAGACAAAGCTGTACAGGCAGCCCGCCTGGCTTTCTCTCTCGGCTCTG
TATGGAGAAGGATGGATGCTTCAGAAAGAGGACGTCTGCTGGACAAGCTGGCGGACTTGGTGGAACGAGACAGGGCCATT
CTTGCGACCATGGAATCGCTCAATGGTGGCAAGCCATTCCTGCAAGCTTTCTATGTGGACTTGCAAGGGGTCATCAAAAC
CCTTCGGTATCATGCTGGCTGGGCTGACAAAATCCACGGGATGACCATTCCAGTAGATGGCGACTACTTCACCTTCACAA
GACACGAACCCGTTGGAGTGTGTGGACAGATCATCCCATGGAACTTCCCCCTGCTGATGTTTGCCTGGAAAATTGCTCCA
GCTCTTTGCTGTGGCAATACAATCGTTATCAAGCCCGCAGAACAAACGCCACTTAGCGCACTCTACATGGGAGCCCTCAT
CAAGGAGGCTGGCTTTCCACCAGGAGTCATCAATATTTTGCCAGGATATGGGCCAACAGCTGGGGCAGCAATAGCGTCTC
ATGTGGGCATAGACAAGATTGCCTTCACGGGCTCCACCGAGGTCGGGAAGCTTGTCCAAGAAGCAGCGGGGAGAAGCAAT
TTGAAGCGAGTAACTTTGGAGCTGGGAGGGAAGAGTCCCAACATCATCTTTGCCGATGCTGACCTGGACTACGCTGTGGA
GCAGGCTCACCAGGGCGTGTTCTTCAACCAAGGCCAGTGCTGCACCGCCGGCTCCCGCATCTTTGTGGAGGAGTCCATCT
ACGAGGAGTTTGTGAGAAGAAGCGTGGAGCGGGCCAAGAGGCGTATAGTGGGGAGTCCCTTTGACCCCACCACGGAGCAG
GGACCCCAGATTGATAAGAAGCAGTACAACAAGATCCTGGAGCTCATCCAGAGCGGCGTGGCGGAGGGCGCCAAGCTGGA
GTGCGGTGGGAAAGGGCTGGGCTGCAAGGGCTTCTTCATCGAACCCACGGTGTTCTCCAACGTCACCGATGACATGCGCA
TCGCCAAGGAGGAGATCTTTGGTCCCGTTCAGGAAATCCTGAGATTTAAGACGATGGATGAAGTTATTGAAAGAGCCAAC
AACTCCGACTTTGGCCTGGTGGCAGCGGTCTTTACCAATGACATCAACAAAGCCCTGACAGTGTCATCTGCAATGCAAGC
TGGGACTGTGTGGATCAACTGTTACAACGCCTTGAATGCCCAGAGCCCCTTTGGAGGATTCAAGATGTCTGGAAATGGGC
GAGAA

Library Parental gene expression (RPM)
SRP017611_brain 10 .47 RPM
SRP017611_kidney 5 .06 RPM
SRP017611_liver 0 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006418 ortholog_one2one 1 retrogene
retro_chof_1106,
Monodelphis domestica ENSMODG00000008641 ortholog_one2one 1 retrogene
retro_mdom_254,
Pan troglodytes ENSPTRG00000007113 ortholog_one2one 1 retrogene
retro_ptro_118,
Sorex araneus ENSSARG00000012720 ortholog_one2one 1 retrogene
retro_sara_40,
Sarcophilus harrisii ENSSHAG00000012217 ortholog_one2one 1 retrogene
retro_shar_111,
Tarsius syrichta ENSTSYG00000004549 ortholog_one2one 1 retrogene
retro_tsyr_8,
Tursiops truncatus ENSTTRG00000002361 ortholog_one2one 1 retrogene
retro_ttru_932,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_15 67.03 100.00
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Download FASTA sequences of all ENSEEUG00000012262 retrocopies