Parental gene:

ALDH1A2, ENSMODG00000008641

Aliases:None
Description:aldehyde dehydrogenase 1 family, member A2 [Source:HGNC Symbol;Acc:15472]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:163075715..163188264(+)


>ENSMODG00000008641
ATGACTTCTAGTAAAATTGAGATGCCTGGAGAGGTGAAGGCAGACCCCACCGCCCTGATGGCATCACTGCACCTTTTACC
TTCGCCCACACTCAACCTTGAGATCAAATATACCAAGATTTTCATTAACAATGAGTGGCAGAATTCAGAAAGTGGGCGTG
TATTTCCAGTCTACAATCCAGCCACTGGGGAGCAGGTGTGTGAAGTTCAAGAAGCAGATAAGGCTGACATAGACAAAGCT
GTGAGAGCCGCACGCCTGGCTTTTTCTCTGGGCTCCGTGTGGAGACGAATGGATGCTTCAGAGAGAGGGCGTCTCCTGGA
CAAGCTAGCTGACTTGGTGGAAAGAGACAGAGCTGTTCTTTCAACCATGGAATCATTAAATGGTGGCAAACCATTCCTCC
AAGCTTTCTATGTGGATTTACAGGGTGTCATCAAAACCCTTCGGTATTATGCAGGCTGGGCAGACAAGATTCATGGGATG
ACCATTCCTGTAGATGGAGATTATTTCACATTTACAAGACACGAACCTATTGGAGTGTGTGGACAGATCATCCCGTGGAA
CTTTCCCTTGCTGATGTTTGCCTGGAAAATTGCTCCAGCTCTGTGCTGTGGCAATACTGTAGTCATTAAGCCAGCGGAAC
AAACACCTCTCAGCGCTCTGTACATGGGAGCCCTCATCAAGGAGGCTGGCTTTCCACCAGGAGTCATCAATATCTTGCCA
GGATATGGGCCAACAGCAGGGGCAGCAATAGCTTCTCATGTTGGCATAGACAAGATCGCCTTCACAGGGTCTACTGAGGT
TGGAAAACTGATCCAAGAAGCAGCTGGAAGGAGTAATTTGAAGAGAGTAACTCTGGAGCTTGGAGGGAAGAGTCCCAATA
TTATTTTTGCAGATGCTGATTTGGACTATGCTGTGGAGCAGGCCCACCAGGGTGTGTTCTTCAATCAAGGGCAGTGCTGT
ACAGCAGGATCCCGCATTTTTGTGGAAGAGTCCATCTATGAAGAGTTTGTTCGAAGAAGTGTGGAGCGTGCCAAGAGGAG
AATAGTTGGAAGTCCTTTTGACCCAACCACCGAACAAGGCCCTCAGATTGACAAGAAACAGTATAACAAGATCCTTGAGC
TCATCCAGAGTGGCGTGGCAGAGGGAGCCAAGCTGGAATGTGGTGGCAAAGGACTGGGTCACAAGGGATTTTTCATTGAG
CCCACTGTGTTTTCCAATGTCACCGATGACATGCGGATTGCCAAGGAAGAGATTTTTGGGCCAGTTCAGGAAATCTTGAG
GTTTAAGACTTTGGATGAAGTTATAGAGCGAGCCAACAATTCTGACCTTGGACTCGTTGCTGCTGTTTTTACAAATGATA
TTAACAAAGCACTCACAGTGTCGGCAGCAATGCAGGCTGGGACTGTTTGGATCAATTGTTACAACGCCTTAAATGCTCAG
AGTCCTTTTGGGGGATTCAAGATGTCTGGAAATGGGCGAGAAATGGGAGAATGCGGTTTGCGAGAGTACTCGGAAGTCAA
GACAGTGACAATAAAGATTCCCCAAAAGAACTCCTAA

Library Parental gene expression (RPM)
SRP007412_brain 39 .45 RPM
SRP007412_cerebellum 12 .73 RPM
SRP007412_heart 18 .74 RPM
SRP007412_kidney 6 .58 RPM
SRP007412_liver 10 .57 RPM
SRP007412_testis 20 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006418 ortholog_one2one 1 retrogene
retro_chof_1106,
Dasypus novemcinctus ENSDNOG00000010541 ortholog_one2one 1 retrogene
retro_dnov_2235,
Erinaceus europaeus ENSEEUG00000012262 ortholog_one2one 1 retrogene
retro_eeur_15,
Pan troglodytes ENSPTRG00000007113 ortholog_one2one 1 retrogene
retro_ptro_118,
Sorex araneus ENSSARG00000012720 ortholog_one2one 1 retrogene
retro_sara_40,
Sarcophilus harrisii ENSSHAG00000012217 ortholog_one2one 1 retrogene
retro_shar_111,
Tarsius syrichta ENSTSYG00000004549 ortholog_one2one 1 retrogene
retro_tsyr_8,
Tursiops truncatus ENSTTRG00000002361 ortholog_one2one 1 retrogene
retro_ttru_932,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_254 67.75 95.17
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Download FASTA sequences of all ENSMODG00000008641 retrocopies