Parental gene:

ZDHHC20, ENSPTRG00000005695

Aliases:None
Description:zinc finger, DHHC-type containing 20 [Source:HGNC Symbol;Acc:20749]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:13:20893622..20973958(-)


>ENSPTRG00000005695
ATGGCGCCCTGGACGCTGTGGCGCTGCTGCCAGCGCGTCGTGGGCTGGGTGCCGGTGCTCTTCATCACCTTCGTGGTCGT
CTGGTCCTACTACGCGTACGTGGTGGAGCTTTGCGTGTTTACTATTTTTGGAAATGAAGAAAATGGAAAGACCGTTGTTT
ACCTTGTGGCTTTCCATCTGTTCTTTGTTATGTTTGTATGGTCCTATTGGATGACAATTTTCACATCTCCCGCTTCCCCC
TCCAAAGAGTTCTACTTGTCCAATTCTGAAAAGGAACGTTATGAAAAAGAATTCAGCCAAGAAAGACAACAAGAAATTTT
GAGAAGAGCAGCAAGAGCTTTACCTATCTATACCACATCAGCTTCAAAAACTATCAGATATTGTGAAAAATGTCAGCTGA
TTAAACCTGATCGGGCACATCACTGCTCAGCATGTGACTCATGTATTCTTAAGATGGATCATCACTGTCCTTGGGTGAAT
AACTGTGTGGGATTTTCTAATTACAAATTCTTCCTGCTGTTTTTATTGTATTCCCTATTATATTGCCTTTTCGTGGCTGC
AACAGTTTTAGAGTACTTTATAAAATTTTGGACGAATGAACTGACAGATACACGTGCAAAATTCCACGTACTTTTTCTTT
TCTTTGTGTCTGCAATGTTCTTCATCAGCGTCCTCTCACTTTTCAGCTACCACTGCTGGCTAGTTGGAAAAAATAGAACA
ACAATAGAATCATTCCGCGCACCCACATTTTCATACGGACCTGATGGAAATGGTTTCTCTCTTGGATGCAGTAAAAATTG
GAGACAAGTCTTTGGTGATGAAAAGAAATATTGGCTACTTCCAATATTTTCAAGCTTGGGTGATGGTTGCAGTTTTCCAA
CTCGCCTTGTGGGGATGGATCCAGAACAAGCTTCTGTTACAAACCAGAATGAGTATGCCAGAAGTAGTGGCTCAAATCAG
CCTTTTCCTATCAAACCACTTAGTGAATCAAAAAACCGCTTGTTGGACAGTGAATCTCAGTGGCTGGAGAATGGAGCTGA
AGAAGGCATCATCAAATCAGGGACAAATAACCATGTAACAATGGCAATAGAAAATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 7 .90 RPM
SRP007412_cerebellum 12 .15 RPM
SRP007412_heart 3 .70 RPM
SRP007412_kidney 4 .13 RPM
SRP007412_liver 2 .85 RPM
SRP007412_testis 67 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012155 ortholog_one2one 2 retrogenes
retro_chof_1627, retro_chof_2008,
Cavia porcellus ENSCPOG00000011489 ortholog_one2one 1 retrogene
retro_cpor_303,
Equus caballus ENSECAG00000016465 ortholog_one2one 1 retrogene
retro_ecab_683,
Homo sapiens ENSG00000180776 ortholog_one2one 1 retrogene
retro_hsap_1211,
Gorilla gorilla ENSGGOG00000000435 ortholog_one2one 2 retrogenes
retro_ggor_1003, retro_ggor_943,
Macaca mulatta ENSMMUG00000007373 ortholog_one2one 1 retrogene
retro_mmul_1288,
Pongo abelii ENSPPYG00000005201 ortholog_one2one 1 retrogene
retro_pabe_1081,
Pan troglodytes ENSPTRG00000014829 other_paralog 1 retrogene
retro_ptro_2171,
Tarsius syrichta ENSTSYG00000003013 ortholog_one2one 1 retrogene
retro_tsyr_998,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_829 91.28 59.18
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Download FASTA sequences of all ENSPTRG00000005695 retrocopies