Parental gene:

ZDHHC20, ENSGGOG00000000435

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:13:3039898..3129519(-)


>ENSGGOG00000000435
ATGGCGCCCTGGACGCTGTGGCGCTGCTGCCAGCGCGTCGTGGGCTGGGTGCCGGTGCTCTTCATCACCTTCGTGGTCGT
CTGGTCCTACTACGCGTACGTGGTGGAGCTCTGCGTGTTTACTATTTTTGGAAATGAAGAAAATGGAAAGACCGTTGTTT
ACCTTGTGGCTTTCCATCTGTTCTTTGTTATGTTTGTATGGTCCTATTGGATGACAATTTTCACATCTCCCGCTTCCCCC
TCCAAAGAGTTCTACTTGTCCAATTCTGAAAAGGAACGTTATGAAAAAGAATTCAGCCAAGAAAGACAACAAGATATTTT
GAGAAGAGCAGCAAGAGCTTTACCTATCTATACCACATCAGCTTCAAAAATTATTCGTTTCTGTTATTTGTGCTTTTCTA
TAAAAAATGGGGTAAGGCACCATTGTGCAGAAAACAACAAATGTGGGATGAAGAAGAACAATCATACAAACTGGAAGGTG
AATAACTGTGTGGGATTTTCTAATTACAAATTCTTCCTGCTGTTTTTATTGTATTCCCTATTATATTGCCTTTTTGTGGC
TGCAACAGTTTTAGAGTACTTTATAAAATTTTGGACGAATGAACTGACAGATACACGTGCAAAATTCCACGTACTTTTTC
TTTTCTTTGTGTCTGCAATGTTCTTCATCAGCGTCCTCTCACTTTTCAGCTACCACTGCTGGCTAGTTGGAAAAAATAGA
ACAACAATAGAATCATTCCGCGCACCTACGTTTTCATACGGACCTGATGGAAATGGTTTCTCTCTTGGATGCAGTAAAAA
TTGGAGACAAGTCTTTGGTGATGAAAAGAAATATTGGCTACTTCCAATATTTTCAAGCTTGGGTGATGGTTGCAGTTTTC
CAACTCGCCTTGTGGGGATGGATCCAGAACAAGCTTCTGTTACAAACCAGAATGAGTATGCCAGAAGTAGTGGCTCAAAT
CAGCCTTTTCCTATCAAACCACTTAGTGAATCAAAAAACCGCTTGTTGGACAGTGAATCTCAGTGGCTGGAGAACGGAGC
TGAAGAAGGCATCGTCAAATCAGGGACAAATAACCATGTAACAGTGGCAATAGAAAATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 6 .38 RPM
SRP007412_cerebellum 6 .11 RPM
SRP007412_heart 1 .19 RPM
SRP007412_kidney 2 .82 RPM
SRP007412_liver 2 .80 RPM
SRP007412_testis 31 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012155 ortholog_one2one 2 retrogenes
retro_chof_1627, retro_chof_2008,
Cavia porcellus ENSCPOG00000011489 ortholog_one2one 1 retrogene
retro_cpor_303,
Equus caballus ENSECAG00000016465 ortholog_one2one 1 retrogene
retro_ecab_683,
Homo sapiens ENSG00000180776 ortholog_one2one 1 retrogene
retro_hsap_1211,
Gorilla gorilla ENSGGOG00000013490 other_paralog 1 retrogene
retro_ggor_2187,
Macaca mulatta ENSMMUG00000007373 ortholog_one2one 1 retrogene
retro_mmul_1288,
Pongo abelii ENSPPYG00000005201 ortholog_one2one 1 retrogene
retro_pabe_1081,
Pan troglodytes ENSPTRG00000005695 ortholog_one2one 1 retrogene
retro_ptro_829,
Tarsius syrichta ENSTSYG00000003013 ortholog_one2one 1 retrogene
retro_tsyr_998,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_943 83.92 92.62
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2. retro_ggor_1003 83.92 92.62
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Download FASTA sequences of all ENSGGOG00000000435 retrocopies