Parental gene:

CSRP1, ENSPTRG00000001836

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:180249946..180274214(-)


>ENSPTRG00000001836
ATGCCGAACTGGGGAGGAGGCAAGAAATGTGGGGTGTGTCAGAAGACGGTTTACTTTGCCGAAGAGGTTCAGTGCGAAGG
CAACAGCTTCCATAAATCCTGCTTCCTGTGCATGGTCTGCAAGAAGAATCTGGACAGTACCACTGTGGCCGTGCATGGTG
AGGAGATCTACTGCAAGTCCTGCTACGGCAAGAAGTATGGGCCCAAAGGCTATGGCTACGGGCAGGGCGCAGGCACCCTC
AGCACTGACAAGGGGGAGTCGCTGGGTATCAAGCACGAGGAAGCCCCTGGCCACAGGCCCACCACCAACCCCAACGCATC
CAAATTTGCCCAGAAGATTGGTGGCTCCGAGCGCTGCCCCCGATGCAGCCAGGCAGTCTATGCTGCGGAGAAGGTGATTG
GTGCTGGGAAGTCCTGGCATAAGGCCTGCTTTCGATGTGCCAAGTGTGGCAAAGGCCTTGAGTCAACCACCCTGGCGGAC
AAGGATGGTGAGATTTACTGCAAAGGATGTTATGCTAAAAACTTCGGGCCCAAGGGCTTTGGTTTTGGGCAAGGAGCTGG
GGCCTTGGTCCACTCTGAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 264 .70 RPM
SRP007412_cerebellum 172 .32 RPM
SRP007412_heart 61 .56 RPM
SRP007412_kidney 277 .39 RPM
SRP007412_liver 95 .81 RPM
SRP007412_testis 15 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012114 ortholog_one2one 1 retrogene
retro_amel_1294,
Echinops telfairi ENSETEG00000017067 ortholog_one2one 1 retrogene
retro_etel_417,
Macaca mulatta ENSMMUG00000020772 ortholog_one2one 1 retrogene
retro_mmul_1505,
Mus musculus ENSMUSG00000026421 ortholog_one2one 1 retrogene
retro_mmus_2226,
Pan troglodytes ENSPTRG00000033768 within_species_paralog 1 retrogene
retro_ptro_43,
Tupaia belangeri ENSTBEG00000008991 ortholog_one2one 1 retrogene
retro_tbel_2176,
Drosophila melanogaster FBgn0259209 ortholog_many2many 1 retrogene
retro_dmel_71,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1920 72.78 80.83
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2. retro_ptro_1922 70.00 81.35
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Download FASTA sequences of all ENSPTRG00000001836 retrocopies