Parental gene:

PRR3, ENSPPYG00000016409

Aliases:None
Description:proline rich 3 [Source:HGNC Symbol;Acc:21149]
Organism:Orangutan (Pongo abelii)
Coordinates:6:31270232..31277883(+)


>ENSPPYG00000016409
ATGCCGAAACGAAAGAAGCAGAATCAGCACCAGCCACCGACACAGCAGCAGCCCCCACTGCCCGAGCGGGAAGAGACTGG
AGATGAGGAGGATGGGAGTCCCATCGGACCACCCAGCCTTCTGGGCCCTCCCCCCATGGCCAATGGAAAACCTGGCGACC
CTAAGTCAGCTCTTCACAGAGGTCCTCCAGGATCAAGGGGACCACTGATTCCACCACTGCTGAGTCTCCCACCTCCTCCT
TGGGGTAGAGGCCCAATTTGGAGAGGCCTTGGCCCCAGGTCTAGCCCATATGGTCGTGGTTGGTGGGGAGTCAATGCAGA
ACCTCCTTTTCCGGGGCCAGGCCATGGGGGTCCCACCAGGGGAAGCTTTCACAAAGAACAGAGAAACCCTCGAAGGCTCA
AAAGCTGGTCTCTTATCAAGAATACCTGCCCGCCCAAGGATGACCCCCAGGTTATGGAAGACAAATCCGACCGCCCTGTC
TGCCGACATTTTGCCAAAAAGGGCCACTGTCGATATGAGGACCTCTGTGCCTTCTACCACCCAGGCGTCAATGGACCTCC
TCTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 15 .98 RPM
SRP007412_cerebellum 18 .00 RPM
SRP007412_heart 1 .72 RPM
SRP007412_kidney 7 .46 RPM
SRP007412_liver 3 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000022770 ortholog_one2one 1 retrogene
retro_cpor_775,
Felis catus ENSFCAG00000025918 ortholog_one2one 2 retrogenes
retro_fcat_1094, retro_fcat_1698,
Gorilla gorilla ENSGGOG00000014604 ortholog_one2one 1 retrogene
retro_ggor_1915,
Myotis lucifugus ENSMLUG00000008758 ortholog_one2one 1 retrogene
retro_mluc_1567,
Macaca mulatta ENSMMUG00000013893 ortholog_one2one 1 retrogene
retro_mmul_1431,
Nomascus leucogenys ENSNLEG00000005104 ortholog_one2one 1 retrogene
retro_nleu_1548,
Otolemur garnettii ENSOGAG00000004430 ortholog_one2one 2 retrogenes
retro_ogar_1030, retro_ogar_1324,
Pan troglodytes ENSPTRG00000017929 ortholog_one2one 1 retrogene
retro_ptro_1861,
Sorex araneus ENSSARG00000002747 ortholog_one2many 2 retrogenes
retro_sara_143, retro_sara_9,
Ictidomys tridecemlineatus ENSSTOG00000011829 ortholog_one2many 1 retrogene
retro_itri_126,
Tarsius syrichta ENSTSYG00000000166 ortholog_one2one 2 retrogenes
retro_tsyr_308, retro_tsyr_841,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2279 78.42 100.00
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Download FASTA sequences of all ENSPPYG00000016409 retrocopies