Parental gene:

MAP2K1, ENSPPYG00000006576

Aliases:None
Description:mitogen-activated protein kinase kinase 1 [Source:HGNC Symbol;Acc:6840]
Organism:Orangutan (Pongo abelii)
Coordinates:15:63548991..63651403(+)


>ENSPPYG00000006576
ATGCCCAAGAAGAAGCCGACGCCCATCCAGCTGAACCCGGCCCCCGACGGCTCTGCGGTTAACGGGACCAGCTCTGCGGA
GACCAACTTGGAGGCCTTGCAGAAGAAGCTGGAGGAGCTAGAGCTTGATGAGCAGCAGCGAAAGCGCCTTGAGGCCTTTC
TTACCCAGAAGCAGAAGGTGGGAGAACTGAAGGATGACGACTTTGAGAAGATCAGTGAGCTGGGGGCTGGCAATGGCGGT
GTGGTGTTCAAGGTCTCCCACAAGCCTTCTGGCCTGGTCATGGCCAGAAAGCTAATTCATCTGGAGATCAAACCCGCAAT
CCGGAACCAGATCATAAGGGAGCTGCAGGTTCTGCATGAGTGCAACTCTCCGTACATCGTGGGTTTCTATGGTGCATTCT
ACAGCGATGGCGAGATCAGTATCTGCATGGAGCACATGGATGGAGGTTCTCTGGATCAAGTCCTGAAGAAAGCTGGAAGA
ATTCCTGAACAAATTTTAGGAAAAGTTAGCATTGCTGTAATAAAAGGCCTGACATATCTGAGGGAGAAGCACAAGATCAT
GCACAGAGATGTCAAGCCCTCCAACATCCTAGTCAACTCCCGTGGGGAGATCAAGCTCTGTGACTTTGGGGTCAGCGGGC
AGCTCATCGACTCTATGGCCAACTCCTTCGTGGGCACAAGGTCCTACATGTCGCCAGAAAGACTCCAGGGGACTCATTAC
TCTGTGCAGTCAGACATCTGGAGCATGGGACTCTCTCTGGTAGAGATGGCGGTTGGGAGGTATCCCATCCCTCCTCCAGA
TGCCAAGGAGCTGGAGCTGATGTTTGGGTGCCAGGTGGAGGGAGATGCGGCTGAATTGACCCCACCTAGGCCAAGGACCC
CTGGGAGGCCCCTTAGCTCATATGGAATGGACAGCCGAAAACCTCCCATGGCAATTTTTGAGTTGTTGGATTACATAGTC
AACGAGCCTCCTCCAAAACTGCCCAGTGGAGTGTTCAGTCTGGAATTTCAAGATTTTGTGAATAAATGCTTAATAAAAAA
CCCCGCAGAGAGAGCAGATTTGAAGCAACTCATGGTTCATGCTTTTATCAAGAGATCTGATGCTGAGGAAGTGGATTTTG
CAGGTTGGCTCTGCTCCACCATCGGCCTTAACCAGCCCAGCACACCCACCCATGCTGTTGGCGTCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 106 .93 RPM
SRP007412_cerebellum 47 .42 RPM
SRP007412_heart 12 .07 RPM
SRP007412_kidney 13 .03 RPM
SRP007412_liver 11 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000033983 ortholog_one2one 1 retrogene
retro_btau_1416,
Cavia porcellus ENSCPOG00000003053 ortholog_one2one 1 retrogene
retro_cpor_483,
Gorilla gorilla ENSGGOG00000003687 ortholog_one2one 1 retrogene
retro_ggor_2650,
Macaca mulatta ENSMMUG00000016840 possible_ortholog 1 retrogene
retro_mmul_2285,
Otolemur garnettii ENSOGAG00000015876 ortholog_one2one 1 retrogene
retro_ogar_1598,
Ochotona princeps ENSOPRG00000007770 ortholog_one2one 1 retrogene
retro_opri_846,
Pongo abelii ENSPPYG00000007993 other_paralog 1 retrogene
retro_pabe_3775,
Pan troglodytes ENSPTRG00000007193 ortholog_one2one 1 retrogene
retro_ptro_2676,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3092 79.32 73.42
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2. retro_pabe_3249 88.94 100.00
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Download FASTA sequences of all ENSPPYG00000006576 retrocopies