Parental gene:

PCNP, ENSOGAG00000001821

Aliases:None
Description:PEST proteolytic signal containing nuclear protein [Source:HGNC Symbol;Acc:30023]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873739.1:1393994..1417632(-)


>ENSOGAG00000001821
ATGGCGGACGGGAAGGCGGGAGAGGAGAAGCCTGAAAAGTCGCAGCGAGCTGGAGCCGCCGGAGGACCTGAAGAAGAAGC
AGAAAAACCTGTGAAAACTAAGACTGTTTCTTCCAGTAATGGAGGGGAAAGTACCAGTCGCAGCGCTGAGAAGAGATCAG
CTGAAGAAGAAGCTGCAGACCTCCCAACAAAGCCTACAAAGATCTCCAAGTTTGGATTTGCCATAGGTAGTCAGATGACA
AAGAAAGCATCAGCTATATCCATCAAACTTGGATCAAGTAAGCCTAAAGAAACTGTTCCAACTCTTGCTCCAAAAACACT
TTCAGTAGCAGCGGCTTTTAATGAAGATGAAGATAGTGAACCGGAAGAAATGCCTCCAGAAGCAAAGATGAGAATGAAGA
ATATTGGAAGGGATACACCAACATCAGCTGGACCAAACTCATTCAATAAAGGAAAGCATGGGTTTTCTGATAACCAGAAG
CTATGGGAACGAAATATAAAATCTCATCTTGGAAATGTCCATGACCAAGACAATTAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007972 ortholog_one2one 11 retrogenes
retro_chof_1170, retro_chof_1215, retro_chof_2070, retro_chof_2280, retro_chof_2290, retro_chof_2553, retro_chof_2575, retro_chof_594, retro_chof_651, retro_chof_806, retro_chof_819,
Callithrix jacchus ENSCJAG00000000508 ortholog_one2many 6 retrogenes
retro_cjac_101, retro_cjac_1569, retro_cjac_1722, retro_cjac_3205, retro_cjac_3332, retro_cjac_401,
Cavia porcellus ENSCPOG00000010610 ortholog_one2one 2 retrogenes
retro_cpor_1335, retro_cpor_443,
Dasypus novemcinctus ENSDNOG00000008873 ortholog_one2one 5 retrogenes
retro_dnov_1606, retro_dnov_259, retro_dnov_370, retro_dnov_910, retro_dnov_98,
Gorilla gorilla ENSGGOG00000025423 possible_ortholog 4 retrogenes
retro_ggor_882, retro_ggor_901, retro_ggor_902, retro_ggor_994,
Loxodonta africana ENSLAFG00000005518 ortholog_one2one 2 retrogenes
retro_lafr_1189, retro_lafr_458,
Macaca mulatta ENSMMUG00000017782 possible_ortholog 3 retrogenes
retro_mmul_1312, retro_mmul_1377, retro_mmul_2598,
Mustela putorius furo ENSMPUG00000011696 possible_ortholog 1 retrogene
retro_mputfur_850,
Procavia capensis ENSPCAG00000007007 ortholog_one2one 3 retrogenes
retro_pcap_161, retro_pcap_194, retro_pcap_273,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_652 73.91 63.48
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2. retro_ogar_2216 77.48 61.80
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3. retro_ogar_2465 77.08 53.93
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4. retro_ogar_3320 60.69 80.90
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Download FASTA sequences of all ENSOGAG00000001821 retrocopies