Parental gene:

HSD17B12, ENSOCUG00000016351

Aliases:None
Description:hydroxysteroid (17-beta) dehydrogenase 12 [Source:HGNC Symbol;Acc:18646]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:1:183332715..183528107(+)


>ENSOCUG00000016351
ATGGAGACCGCTCTCCCTGCCGCCGGCTTCCTGTATTGGGTGGGCGCCGGCACGGTGGCCTACCTGGCCCTGCGCATCTC
GTACTCGCTCTTCTGGGCCCTTCGGGTCTGGGGTGTGGGCAACGAGGCGTGGGTCGGGCCGGGGCTCGGTGAATGGGCAG
TTGTGACAGGCAGCACTGATGGAATTGGAAAATCATATGCAGAACAGTTAGCAAAGCGTGGAATGAACGTTGTTCTCATC
AGCAGATCTCAGGATAAGCTAAACCAAGTTTCCAATGAAATAAAAGAAAAATTCAAAGTGGAGACACGAACTATTGCTGT
TGACTTTGCATCAGAAGATATTTATAACAAAATTGAAACAGGCTTGGCAGGTCTTGAAATTGGCGTTTTAGTGAACAACG
TGGGAATGTCATATGAGTATCCTGAATACTTTTTGGACATCCCTGACTTGGACAATACCATCAAGAAACTGATAAATATT
AATGTTCTTTCTGTTTGTAAGATGACACGATTGGTGCTGCCTCGCATGGTAGAAAGATCTAAAGGTGCAATTCTGAACAT
CTCCTCTGCCAGTGGCACGTTCCCAGTTCCACTGCTGACCATCTACTCTGCAACCAAGGCTTTTGTAGATTTCTTCTCTC
AGTGCCTCCATGAGGAATACAGGAGCAAGGGCATCTTTGTGCAGAGCGTGCTGCCATACTACGTTGCTACAAAACTGGCT
AAAATCCGGAAGCCTACTTTTGATAAGCCCTCGTCTGAGACGTTTGTGAAGTCTGCAATTAAGACAGTTGGCTTGCAGTC
TCGCACTAATGGATACCTGGTCCATTCTCTGATGGTAAGTCAATCTTCA

Library Parental gene expression (RPM)
SRP017611_brain 29 .19 RPM
SRP017611_kidney 32 .33 RPM
SRP017611_liver 14 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000011325 ortholog_one2many 1 retrogene
retro_cjac_2489,
Dipodomys ordii ENSDORG00000004834 ortholog_one2one 1 retrogene
retro_dord_561,
Homo sapiens ENSG00000149084 ortholog_one2one 1 retrogene
retro_hsap_3684,
Gorilla gorilla ENSGGOG00000002003 ortholog_one2one 1 retrogene
retro_ggor_2491,
Nomascus leucogenys ENSNLEG00000017959 ortholog_one2one 1 retrogene
retro_nleu_2273,
Otolemur garnettii ENSOGAG00000009102 ortholog_one2one 1 retrogene
retro_ogar_3391,
Pongo abelii ENSPPYG00000003343 ortholog_one2one 1 retrogene
retro_pabe_3021,
Pan troglodytes ENSPTRG00000003522 ortholog_one2one 1 retrogene
retro_ptro_2499,
Ictidomys tridecemlineatus ENSSTOG00000005473 ortholog_one2one 1 retrogene
retro_itri_1099,
Tursiops truncatus ENSTTRG00000005103 ortholog_one2one 1 retrogene
retro_ttru_772,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1335 58.67 52.65
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Download FASTA sequences of all ENSOCUG00000016351 retrocopies