Parental gene:

ENSCJAG00000011325

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:11:106837667..107011206(+)


>ENSCJAG00000011325
ATGGAGAGCGCTCTCCCTGTCGCCGGCTTCCTGTACTGGGTGGGCGCGGGCACCGTGGCCTACGTAGCCCTTCGCATCTC
GTACTCACTCTTCACGGCCTTCCGGGTCTGGGGAGTGGGGAATGAGGCGGGGGTCGGCCCGGGGCTCGGAGAATGGGCAG
TTGTCACAGGTAGTACTGATGGAATTGGAAAATCATATGCAGAAGAGTTAGCAAAGCGTGGAATGAAGGTTGTCCTTATC
AGCAGATCACAGGATAAACTTGACCAGGTTTCCAGTGAAATAAAAGAAAAATTTAAAGTGGAGACAAGAACCATTGCTGT
TGACTTTGCATCAGAAGACATTTATAATAAAATTGAAACAGGCTTGGCTGGTCTTGAAATCGGCGTCTTAGTGAACAACG
TGGGAATGGCATATGAGTATCCTGAACACTTTTTGGACATTCCTGACTTGGACAATGTGATCAAGAAAATGATAAATATT
AATATTCTTTCTGTTTGTAAGATGACACAATTGGTCCTGCCTGGCATGATAGAAAGATCTAAAGGGGCGATTCTGAACAT
CTCATCTGCCAGTGGCTCGCACCCCGTCCCAATGATGACCATCTATTCTGCAACCAAGACTTTTGTAGATTTCTTCTCTC
GGTGCCTCCATGAGGAGTATAGGAGCAAGGGCATCTTTGTGCAGAGTGTCCTGCCATACTTCGTAGCTACAAAACTGGCT
AAGATCCGAAAGCCAACTTTGGATACACCTTCTTCGGAGACGTTTGTGAAGTCTGCAATTAAAACAGTAGGCCTGCAGTC
CCGAACCAATGGATACCTGATCCATGCTCTTATGGGCTCGGTCATCTCAGTCCTACCTTCTTGGATTTATTTTAAATTAG
CCATAGATATGAACAAGTCTACAAGGGCTCGCTATCTGAAGAAAATCAAGAAGAACTAA

Library Parental gene expression (RPM)
SRP051959_colon 46 .04 RPM
SRP051959_heart 32 .19 RPM
SRP051959_kidney 101 .86 RPM
SRP051959_liver 56 .14 RPM
SRP051959_lung 31 .01 RPM
SRP051959_lymph_node 26 .39 RPM
SRP051959_skeletal_muscle 16 .31 RPM
SRP051959_spleen 31 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000004834 ortholog_one2many 1 retrogene
retro_dord_561,
Homo sapiens ENSG00000149084 ortholog_one2many 1 retrogene
retro_hsap_3684,
Gorilla gorilla ENSGGOG00000002003 ortholog_one2many 1 retrogene
retro_ggor_2491,
Nomascus leucogenys ENSNLEG00000017959 ortholog_one2many 1 retrogene
retro_nleu_2273,
Oryctolagus cuniculus ENSOCUG00000016351 ortholog_one2many 1 retrogene
retro_ocun_1335,
Otolemur garnettii ENSOGAG00000009102 ortholog_one2many 1 retrogene
retro_ogar_3391,
Pongo abelii ENSPPYG00000003343 ortholog_one2many 1 retrogene
retro_pabe_3021,
Pan troglodytes ENSPTRG00000003522 ortholog_one2many 1 retrogene
retro_ptro_2499,
Ictidomys tridecemlineatus ENSSTOG00000005473 ortholog_one2many 1 retrogene
retro_itri_1099,
Tursiops truncatus ENSTTRG00000005103 ortholog_one2many 1 retrogene
retro_ttru_772,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2489 80.23 55.13
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Download FASTA sequences of all ENSCJAG00000011325 retrocopies