Parental gene:

VMA21, ENSOCUG00000015201

Aliases:None
Description:VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:22082]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018731:1322365..1330808(-)


>ENSOCUG00000015201
ATGTGGAGTGGCTGGGCTACTCGCCCGGCCTGCTCCTGGAGCACAGGCCGCCCCTGGCAGGGCGCACGCCGCGGAGCCCC
CATCGCCCAGCGGCCGCCGACTTCAGCGCCCAGCTGCCAGCAGAGTGCCCGCTGCCGGCACCGCGACGCCATGGAGCGCC
TTGATAAAGCGGCGCTGAACGCGCTGCAGCCGCCCGAGTTCAGAAGTGAAAATTCGCTAGCATCTACCCTGAAGACACTC
CTGTTCTTCACAGCTTTAATGATCACTGTTCCTATTGGGTTATACTTCACAACAAAATCTTATATATTTGAAGGTGCCCT
TGGGATGTCCAATAGGGATAGCTACTTTTACGCTGCTATTGTTGCAGTGGTTGCAGTCCATGTGGTGCTGGCCCTCTTTG
TGTATGTGGCCTGGAACGAAGGCTCAAGACAGTGGCGTGAAGGCAAACAGGATTAA

Library Parental gene expression (RPM)
SRP017611_brain 3 .26 RPM
SRP017611_kidney 6 .28 RPM
SRP017611_liver 1 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000006296 ortholog_one2one 1 retrogene
retro_btau_1106,
Callithrix jacchus ENSCJAG00000003916 possible_ortholog 1 retrogene
retro_cjac_150,
Dasypus novemcinctus ENSDNOG00000008426 possible_ortholog 1 retrogene
retro_dnov_504,
Homo sapiens ENSG00000160131 ortholog_one2one 1 retrogene
retro_hsap_3724,
Macaca mulatta ENSMMUG00000009034 ortholog_one2one 1 retrogene
retro_mmul_1693,
Mus musculus ENSMUSG00000073131 ortholog_one2many 2 retrogenes
retro_mmus_116, retro_mmus_3675,
Nomascus leucogenys ENSNLEG00000013711 ortholog_one2one 1 retrogene
retro_nleu_1971,
Pongo abelii ENSPPYG00000020820 ortholog_one2one 1 retrogene
retro_pabe_3133,
Rattus norvegicus ENSRNOG00000049744 ortholog_one2many 1 retrogene
retro_rnor_2843,
Ictidomys tridecemlineatus ENSSTOG00000011179 ortholog_one2one 1 retrogene
retro_itri_500,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_443 66.36 70.86
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Download FASTA sequences of all ENSOCUG00000015201 retrocopies