Parental gene: | ENSOCUG00000013866 |
| Aliases: | None |
| Description: | selenoprotein T (SELT), mRNA [Source:RefSeq mRNA;Acc:NM_001199819] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 14:44490694..44519323(+) |
>ENSOCUG00000013866
ATGAGGCTTCTGCTGCTTCTCCTGGTGGCGGCGTCGGCGGTGGCCCGGAGCGAGGCCTCGGCCAACCTGGGCGGCGTGCC
CAGCAAGAGATTAAAGATGCAGTACGCTACGGGGCCGCTGCTGAAGTTCCAGATTTGTGTTGCTGTTAGCTGTAGGTATA
GGCGGGTGTTTGAGGAGTACATGCGGGTTATTAGCCAGCGGTACCCAGACATCCGAATTGAAGGAGAGAATTACCTCCCT
CAACCAATATATAGACACATAGCATCTTTCCTGTCAGTCTTCAAGCTAGTATTAATAGGCTTAATAATTGTTGGCAAAGA
TCCTTTTGCTTTCTTTGGCATGCAAGCTCCTAGTATCTGGCAATGGGGCCAGGAAAATAAGGTCTATGCATGTATGATGG
TTTTCTTCTTGAGCAACATGATTGAGAACCAGTGTATGTCAACAGGTGCATTTGAGATAACTTTAAATGATGTGCCTGTG
TGGTCTAAACTGGAATCTGGTCACCTTCCATCCATGCAACAACTTGTTCAAATTCTTGACAATGAAATGAAACTCAATGT
GCATATGGATTCAATCCCACACCATCGGTCATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 37 .91 RPM |
| SRP017611_kidney | 58 .08 RPM |
| SRP017611_liver | 9 .87 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000002576 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000013363 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000021273 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000029483 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000007522 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_327 | 73.44 | 94.42 | Please wait, loading  |
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| 2. | retro_ocun_328 | 72.40 | 94.42 | Please wait, loading |
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| 3. | retro_ocun_557 | 89.85 | 100.00 | Please wait, loading |
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| 4. | retro_ocun_779 | 79.83 | 59.39 | Please wait, loading |
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| 5. | retro_ocun_1080 | 87.63 | 93.91 | Please wait, loading |
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| 6. | retro_ocun_1229 | 89.51 | 72.59 | Please wait, loading |
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| 7. | retro_ocun_1783 | 83.08 | 100.00 | Please wait, loading |
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| 8. | retro_ocun_1803 | 70.50 | 69.54 | Please wait, loading |
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| 9. | retro_ocun_1831 | 69.78 | 69.54 | Please wait, loading |
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Download FASTA sequences of all ENSOCUG00000013866 retrocopies