Parental gene:

ENSCPOG00000002576

Aliases:None
Description:selenoprotein T precursor [Source:RefSeq peptide;Acc:NP_001244921]
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_8:47958843..47979322(+)


>ENSCPOG00000002576
ATGAGGCTTCTGCTGCTGTTTCTGCTGGCCGCGTCGGCAGTGGTCCGGAGCGAGGCCTCGGCCAATCTGGGCGGTGTGCC
CAGCAAGAGACTGAAGATGCAGTACGCCACAGGGCCGCTGCTTAAGTTCCAGATTTGTTGTATATTGTGCAGGTATAGGC
GGGTGTTTGAGGAGTACATGAGGGTTATTAGCCAGCGGTACCCAGACATCCGAATTGAAGGAGAGAATTACCTTCCTCAA
CCAATTTATAGGCACATAGCATCTTTCCTGTCAATCTTCAAACTAGTATTAATAGTCTTAATAATTGTTGGCAAGGATCC
TTTTGCTTTCTTTGGCATGCAAGCTCCTAGCATCTGGCAGTGGGGCCAAGAAAATAAGGTCTATGCATGTATGATGGTTT
TCTTCTTGAGCAACATGATTGAGAACCAGTGTATGTCAACAGGTGCATTTGAGATAACTTTAAATGATGTACCTGTGTGG
TCTAAGCTGGAGTCTGGTCATCTTCCATCCATGCAACAACTTGTTCAAATTCTTGACAATGAAATGAAGCTCAATGTGCA
TATGGATTCAATCCCACATCATCGATCATAG

Library Parental gene expression (RPM)
SRP017611_brain 29 .33 RPM
SRP017611_kidney 41 .14 RPM
SRP017611_liver 18 .63 RPM
SRP040447_lung 39 .98 RPM
SRP040447_skeletal_muscle 17 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000013363 ortholog_one2one 2 retrogenes
retro_eeur_63, retro_eeur_697,
Monodelphis domestica ENSMODG00000021273 possible_ortholog 1 retrogene
retro_mdom_467,
Oryctolagus cuniculus ENSOCUG00000013866 ortholog_one2one 9 retrogenes
retro_ocun_1080, retro_ocun_1229, retro_ocun_1783, retro_ocun_1803, retro_ocun_1831, retro_ocun_327, retro_ocun_328, retro_ocun_557, retro_ocun_779,
Pongo abelii ENSPPYG00000029483 ortholog_one2one 1 retrogene
retro_pabe_3478,
Tursiops truncatus ENSTTRG00000007522 ortholog_one2one 2 retrogenes
retro_ttru_1556, retro_ttru_694,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_459 80.62 65.31
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Download FASTA sequences of all ENSCPOG00000002576 retrocopies