Parental gene:

COIL, ENSOCUG00000011345

Aliases:None
Description:coilin [Source:HGNC Symbol;Acc:2184]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:19:31106867..31124675(+)


>ENSOCUG00000011345
ATGGCAGCTTCCGACACGGTTAGGTTACGGCTTCAATTTGATTATCCACCGCCAGCCACTCCACACTGTACAGCCTTCTG
GCTTCTGGTCGACTTGAACCGATGCCGAGTCGTCACGGATCTCATCAGTCTCATCCGCCAGCGCTTCGGCTTCAGTTCGG
GGGCCCTCCTGGGCCTCTACTTGGAGGGGGGGCTCCTGCCCCCAGCCGAGAGCGCGCGCCTGGTGCGGGACAACGACTGC
CTCAGAGTTAAATTAGAAGAGAGAGGAGTTGCTGAGAATTCTGTAGTAGTCAGGAATGGTGATAGTACTCATTTTTTACC
TAGAAAAGCAAAGAAGCGGGCATTTAAGTTGGAGGAGAACGAAGAAAGTGACATAGATTGCAAGTATTCAAAGAAGCATT
GGAAAAGGCAAGAAAACAGTAGTAATAATGAGAAGGCCTTGGTTCCGCACACAAAAGCAGTCACAGAGCAGGCTGTGGGG
AAAAAAAACAAGAGAAAGAACAAAGCGGCATGTGGCACGATGGATGACAATGATGAAGAAACCCAAAGGAAATCACCAAA
GAAAAAAGAGAAATGCGAATATAAAAAGCAGACCAAGAATTCCAAGTCTCCCAAAGTGCCCGTGGTAAAAGAGTGGACCG
CCCAGAACTGTAGTACTCCAAAAAGTCCTGCTAAGAACAGCCTGGCGAAAGCCAGAAGGAAAGCTGGTGTAGGCACTGTT
TCAAAAGACAGCCCCAGTTCCTCCTCGGAGTCGGAGTCTTGTCACGAATCCACCAGTGATGGGCTCAGCAATGTCACTTC
GGAGGCCAGAAATTCCTCAGAGAAAATTCCCACTGAGTTAGCAAAGGAAGGATCCTCTACAAAAAATACGACTGCAAACA
AACTGCCTGCAAAAGGTGGCTTTAGCCTTACTCCGAGCCAGGGCAAGACCACCAGAACATCCTCGTCTAGTTCAGACTCG
AGTTCAGAGTCGGATGACCAGTGCCTGCTGTCTAAGAGCACTCCCGAGAGTGCCTCGGGGCTCTTCAAGACGGCTGGCCT
CTTTCCAGGGAGAGGCTGCCCGGGTCCAGGGCTGTCCTCACAGGTGCCACCTGCTGCCAGCTGGAAGTATTCTGACTTAA
GCGGTGGCAGACAGGCTCCCGGTCCTCCCTCTGTTGCGACTCTCCCCTCCAGTCTAGGAAGAGGATGGGGTCGAGGAGAG
GACCTTCTTTCTTGGAAGGGAGCCAGAGGTCGGGGCGCGTGGGGGAGAGGGCGAGGGCGAGGGCAGGCTGTGTCTGGTGT
TGTAAACAGAAATGCTGACTATCAGAAGCAGAAGCAATTAAATGAAATGATAACAAACGCATCTACTTTTATCCAGAATC
CAGTAGAGACACACAAGAAGGATTATAGTCTGTTACCACTCTTAGCAGCTGCCCCTCAGGTTGGAGAAAAGATTGCATTT
AAGCTTTTGGAACTAACATCCAATTACTCTCCCGATGTCTCTGACTACAAGGAAGGAAAAATACTAAGCCACAATCCAGA
GACCCAGCAAGTAGATATAGAAATTCTTTCATCCTTACCTGCCTTGAAAGAACCTGGGAAATTTGATTTGGTTTATCACA
ACGAAAATGGCACCGAGGTAGTGGAGTATGCCGTGACGCAGGAAAGGAAGATCACCGTTTTTTGGAGAGAGTTGATTGAT
CCAAGGCTGATTATTGAACCTGCAAGTAACACCTTGCGTTCAGAACTTGTC

Library Parental gene expression (RPM)
SRP017611_brain 17 .05 RPM
SRP017611_kidney 14 .70 RPM
SRP017611_liver 6 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008740 ortholog_one2one 1 retrogene
retro_chof_1121,
Callithrix jacchus ENSCJAG00000013960 ortholog_one2one 1 retrogene
retro_cjac_2240,
Dasypus novemcinctus ENSDNOG00000023961 ortholog_one2many 1 retrogene
retro_dnov_1986,
Echinops telfairi ENSETEG00000003687 ortholog_one2one 1 retrogene
retro_etel_1537,
Nomascus leucogenys ENSNLEG00000008026 ortholog_one2one 1 retrogene
retro_nleu_1014,
Pongo abelii ENSPPYG00000008248 ortholog_one2one 1 retrogene
retro_pabe_305,
Tupaia belangeri ENSTBEG00000008882 ortholog_one2one 4 retrogenes
retro_tbel_2118, retro_tbel_3549, retro_tbel_3961, retro_tbel_838,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1798 68.00 63.60
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Download FASTA sequences of all ENSOCUG00000011345 retrocopies