Parental gene:

ENSDNOG00000023961

Aliases:None
Description:None
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_2409:1283..41880(-)


>ENSDNOG00000023961
ATGGCAGCCTCCGAGACGGTTAGGTTACGACTTCAATTTGACTACCCGCCGCCCGCTACCCCGCACTGCACGGTCTTCTG
GCTTCTGGTCGACTTGAACCGATGTCGAGTAGTTACGGATCTCATTAGTCTCGTCCGCCAACGGTTCGGCTTCAGTTCTG
GGGCCTTCCTAGGTCTCTATCTGGACGGGGGGCTCTTGCCCCCCACCGAGAGCGCGCGCCTGGTGCGAGACAACGACTGT
CTTAGCGTTAAGTTAGAAGAGAGAGAAGCTGCTGAGAATTCTGCAGTAGTCATTAATGGTGACAGTGCTCAGTTATTACC
TAGAAAAGCAAAGAAGCGGACGCTTAAGTTTGAGGAAGAAGACACTGAACTAGGTTACAGATATTCAAAGAAGCAATGGA
AGAGGCAAGAGAGCAATAATGAGAAGACCCTGGATCTGGACTCAAAAGTTGTCACAGAGCAGAGCGTGAGGAGAAAAAAC
AAGAGGAAAAATAAAACAGTATGTGAGGTAATGGATGAGGAGGAGGAGACCAAAAGAAAATCACCGAAGAAGAAGGAGAA
ATGTGAATATAAAAAACAAACTAAGAATCCCAAGTCTAAAGCACAGGCAGCGGAGTGGGCCATTCAGAACTGTAGTCCTC
CAAAAGTTTCTCCTGGAAGAAACAGCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCAGTCAGTGATGGTCTCAGCAATGTCATTTTGGAGGTCAGAAAGTC
TTCCGAGAAAAAATCAACTGAGCTATCCAAGGAAGGACCTTGTGTTAACAACACACCTACAAACAAACTGATTGCAAAAA
CTGGCTTTAACCTTACCCCTGCTAAGGGCAAGACAAGAAAAACATCTTCCAGTTCAGACTCCGGTTCAGAGTCAGATGAA
CAATGCGTGATATCCAAGAGCACCACAGTGTGTGCTGCAGGTTTCTTAAAGACAGCAGGCCTCTTCACAGGGAGTGGTTG
CCCGAGACCTGGGCCATCCTCCCAGACTCCAAGTGCTACCTCGTGGAAGCACTCAGACTCAAATGGTGGCAAACAGGCTC
CTGGTCCCCCTCCCAATTTATCTGTCCCCACCAGTTTGGGAAGAGGATGGGGTAGAGGAGAGGACCTTCTTTCTTGGAAG
GGAGCCAGGGGTCGGGGAATGCGGGGAAGAGGTCGAGGACGAGGGCAAACCATTCCTTGTGTTTTAAGCAGAAACAGTGA
ATGTCAGAAGCAGCAGCAATTAAATGAATTGCTGACAAACTCATCAACTATTATTCAGAATCCAGTAGAGATACAAAAGA
AGGACTACAGTCTGTTACCGCTGTTAGCAGCTGCCCCTCAAGTTGGAGAAAAGATTGCATTTAAGCTTTTGGAACTAACA
TCCGATTACTCCCCTGATGTCTCTGATTACAAGGAAGGAAAAATATTAAGCCACAATCCAGAGACCCAGCAAGTAGATAT
AGAAATCCTTTCATCTTTACCTGCTATAAAAGAACCTGGGAAATTTGATTTGGTTTATCACAATGAAAATGGAACTGAGG
TAGTGGAGTATGCTGTCACACAGGAGAGGAAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 7 .20 RPM
SRP012922_cerebellum 9 .62 RPM
SRP012922_heart 4 .64 RPM
SRP012922_kidney 3 .83 RPM
SRP012922_liver 2 .17 RPM
SRP012922_lung 7 .18 RPM
SRP012922_quadricep_muscle 3 .98 RPM
SRP012922_spleen 8 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008740 ortholog_one2many 1 retrogene
retro_chof_1121,
Callithrix jacchus ENSCJAG00000013960 ortholog_one2many 1 retrogene
retro_cjac_2240,
Echinops telfairi ENSETEG00000003687 ortholog_one2many 1 retrogene
retro_etel_1537,
Nomascus leucogenys ENSNLEG00000008026 ortholog_one2many 1 retrogene
retro_nleu_1014,
Oryctolagus cuniculus ENSOCUG00000011345 ortholog_one2many 1 retrogene
retro_ocun_1798,
Pongo abelii ENSPPYG00000008248 ortholog_one2many 1 retrogene
retro_pabe_305,
Tupaia belangeri ENSTBEG00000008882 ortholog_one2many 4 retrogenes
retro_tbel_2118, retro_tbel_3549, retro_tbel_3961, retro_tbel_838,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1986 68.64 51.29
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000023961 retrocopies