Parental gene:

UCHL3, ENSOCUG00000006789

Aliases:None
Description:ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:HGNC Symbol;Acc:12515]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:8:77137203..77206063(+)


>ENSOCUG00000006789
ATGGAGGGTCAGCGCTGGCTGCCGCTGGAGGCTAATCCAGAGGTCACCAACCAGTTTCTCAAGCAATTAGGTCTGCATCC
TAACTGGCAGTTTGTTGATGTATATGGAATGGATCCTGAACTTCTTAGCATGGTACCAAGACCAGTTTGTGCAGTGTTAC
TTCTCTTCCCTATTACAGAAAAGTATGAAATATTCAGAACAGAAGAAGAGGAAAAAATAAAATCTCAGGGACAGGATGTG
ACATCATCAGTATATTTCATGAAGCAAACAATCAGCAATGCCTGTGGAACAATCGGATTGATCCATGCTATTGCGAACAA
TAAAGACAAGATGCACTTTGAATCTGGATCAACCTTGAAAAAATTCCTGGAAGAGTCTGTGTCAATGAGCCCTGAAGAAC
GAGCCAAGTACTTGGAGAACTATGACGCCATTCGAGTGACTCATGAGACCAGTGCCCACGAAGGTCAGACTGAGGCACCA
AATATAGATGAAAAAGTAGATCTTCATTTTATTGCATTAGTTCATGTAGATGGGCATCTCTATGAATTAGACGGGCGGAA
ACCATTTCCAATTAACCATGGAAAAACTAGTGATGAAACTTTATTAGAGGATGCCATAGAAGTTTGCAAGAAGTTTATGG
AACGTGACCCTGATGAATTAAGATTTAACGCGATCGCTCTTTCTGCAGCATAG

Library Parental gene expression (RPM)
SRP017611_brain 19 .98 RPM
SRP017611_kidney 12 .97 RPM
SRP017611_liver 6 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000012261 ortholog_one2one 1 retrogene
retro_cpor_1217,
Equus caballus ENSECAG00000024190 ortholog_one2one 1 retrogene
retro_ecab_400,
Myotis lucifugus ENSMLUG00000003442 ortholog_one2many 1 retrogene
retro_mluc_362,
Mus musculus ENSMUSG00000022111 ortholog_one2many 1 retrogene
retro_mmus_177,
Oryctolagus cuniculus ENSOCUG00000001353 within_species_paralog 1 retrogene
retro_ocun_309,
Otolemur garnettii ENSOGAG00000017114 ortholog_one2one 1 retrogene
retro_ogar_2285,
Rattus norvegicus ENSRNOG00000009530 ortholog_one2many 1 retrogene
retro_rnor_2227,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_382 89.18 100.00
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Download FASTA sequences of all ENSOCUG00000006789 retrocopies