Parental gene:

ENSOCUG00000006235

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:9:40566713..40585278(+)


>ENSOCUG00000006235
ATTCAGTGGTCCCAATTTAAAGGCTATTTTATTTTCAAACTGGAGAAAGTGATGGATGATTTCAGAACTTCAGCTCCTGA
ACCAAGAGGTCCTCCCAACCCTAATGTCGAGTATATTCCCTTTGATGAAATGAAGGAAAGAATACTGAAAATTGTCACTG
GATTTAATGGTATCCCTTTTACTATTCAGCGACTATGTGAATTGCTAACAGATCCAAGAAGAAACTATACAGGAACAGAC
AAATTTCTCAGAGGAGTAGAAAAGAATGTGATGGTTGTTAGCTGTGTTTATCCTTCTTCAGAGAAAACCAGTTCTAATAG
TTTAAATAGAATGAATGGTGTTATGTTTCCTGGAAATTCACCAAGCTATACTGACAGGTCTAATATAAATGGGCCTGGGA
CGCCCAGGCCACTTAATCGACCAAAGGTTTCTTTGTCGGTTCCAATGACAACAAATGGTTTGCCTGAGAGTCCAGACAGT
AAAGAGTCAAACTTACAGCAAAATGAAGAGAAAAACCACAGTGACTCGCTGGCATCTGAATCAGAAGTCTCCTCAGTGAG
CCCCATAAAAAATAAACACCCAGATGAAGACGCCGTAGAAGCGGAGGGCCACGAAGTAAAAAGACTCAGGTTTGACAAAG
AAGGGGAAGTGAGAGAAGCGGCCGGGCAGACAGCTTCCAGTGAGAGTTCTTCAGTTCTGGCAGAAGACGCAGAAGCCCTG
TCTTCACCTCAGGGTAAAGACAAAGAAAGCCACACTGCCAGGCAGCACTGTAAAATCAAATTTAACTACAACAACGTTTG
CTTATTTTTAGAGTCTTTTATGACATCAAGAGAAATGATCCCAGAAAGAAAAAATCAAGATAAAGAATCTGATGATGCCT
TAACTGTGAATGAAGAGACTTCTGAGGAAAATAATCAAATGGAGGATTCCGATGTGTCTCAAGCGGAGAAAGATTTACAT
TCTGAAGGTAGTGGAAATACAGGCCCTGTAAGTAATGGTTCTAACTGCCATGAAACAGAAGAATTAGAAGGATCCAGCTC
CAGTGAACCTGGAGAGATTCTGTCAGAGTCATCCATGGAAAATGATGATGAAGCCTCAGAAGTCCCAGAGGAGCCAATGG
AGCAGGACTGA

Library Parental gene expression (RPM)
SRP017611_brain 26 .77 RPM
SRP017611_kidney 24 .53 RPM
SRP017611_liver 21 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007954 ortholog_one2many 3 retrogenes
retro_chof_1347, retro_chof_1914, retro_chof_2285,
Echinops telfairi ENSETEG00000019946 ortholog_one2many 2 retrogenes
retro_etel_1238, retro_etel_148,
Homo sapiens ENSG00000163605 ortholog_one2many 6 retrogenes
retro_hsap_2744, retro_hsap_2745, retro_hsap_2746, retro_hsap_2904, retro_hsap_3138, retro_hsap_3283,
Loxodonta africana ENSLAFG00000000513 ortholog_one2many 1 retrogene
retro_lafr_603,
Macaca mulatta ENSMMUG00000016959 ortholog_one2many 1 retrogene
retro_mmul_1224,
Mus musculus ENSMUSG00000052144 ortholog_one2many 3 retrogenes
retro_mmus_1068, retro_mmus_1157, retro_mmus_3474,
Pan troglodytes ENSPTRG00000015108 ortholog_one2many 5 retrogenes
retro_ptro_1855, retro_ptro_1856, retro_ptro_2121, retro_ptro_2220, retro_ptro_2974,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_292 98.05 68.35
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Download FASTA sequences of all ENSOCUG00000006235 retrocopies