Parental gene:

AP2M1, ENSOCUG00000004556

Aliases:None
Description:adaptor-related protein complex 2, mu 1 subunit [Source:HGNC Symbol;Acc:564]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:14:81523949..81532418(-)


>ENSOCUG00000004556
ATGATCGGAGGCTTATTCATCTATAATCACAAGGGGGAGGTGCTCATCTCCCGGGTCTACCGAGATGACATCGGGAGGAA
TGCAGTGGACGCCTTCCGGGTCAATGTTATCCACGCCCGGCAGCAGGTGCGCAGCCCCGTCACCAACATTGCTCGCACCA
GCTTCTTCCATGTTAAGCGTTCCAACATCTGGCTGGCAGCTGTCACCAAGCAGAATGTCAACGCTGCCATGGTCTTCGAA
TTCCTCTATAAGATGTGTGACGTAATGGCTGCCTACTTTGGCAAGATCAGCGAAGAAAACATCAAGAACAATTTTGTGCT
CATATACGAGCTGCTGGATGAGATCCTGGACTTTGGCTACCCACAGAACTCTGAGACAGGCGCTCTGAAAACCTTCATTA
CCCAGCAGGGCATCAAGAGTCAGCATCAGACAAAAGAAGAACAGTCCCAGATCACCAGCCAGGTGACTGGGCAGATCGGC
TGGCGGCGAGAAGGCATCAAGTATCGCCGGAATGAGCTCTTCTTGGATGTGCTGGAGAGTGTGAACCTACTGATGTCCCC
ACAGGGGCAGGTGCTGAGTGCCCATGTGTCCGGCCGGGTGGTGATGAAGAGCTACCTGAGTGGCATGCCCGAGTGCAAGT
TTGGGATGAATGACAAGATTGTAATTGAAAAGCAAGGCAAAGGCACAGCTGATGAAACAAGCAAGAGCGGGAAGCAATCA
ATTGCCATTGATGACTGCACCTTCCACCAGTGTGTGCGACTCAGCAAGTTTGACTCTGAACGCAGCATCAGCTTCATCCC
ACCAGATGGAGAGTTTGAGCTCATGAGGTATCGCACCACCAAGGACATCATCCTTCCTTTTCGGGTGATTCCGCTGGTAC
GGGAAGTGGGACGCACCAAACTGGAGGTAAAGGTGGTCATCAAGTCCAACTTCAAGCCCTCACTGCTGGCTCAGAAAATT
GAGGTGCGGATTCCAACCCCACTGAACACAAGTGGTGTGCAGGTGATCTGCATGAAGGGGAAGGCCAAGTATAAGGCCAG
TGAGAACGCCATCGTATGGAAGATCAAGCGCATGGCAGGCATGAAGGAATCGCAGATCAGCGCAGAGATTGAGCTTCTGC
CCACCAATGACAAGAAAAAATGGGCCCGACCTCCTATTTCCATGAATTTTGAGGTGCCATTTGCGCCTTCTGGCCTCAAG
GTGCGCTACTTGAAGGTGTTTGAACCGAAGCTGAACTACAGCGACCACGACGTCATCAAATGGGTGCGCTACATTGGCCG
CAGCGGCATTTACGAGACCCGCTGCTAG

Library Parental gene expression (RPM)
SRP017611_brain 416 .67 RPM
SRP017611_kidney 219 .94 RPM
SRP017611_liver 67 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020106 ortholog_one2one 1 retrogene
retro_btau_1156,
Canis familiaris ENSCAFG00000012257 ortholog_one2one 2 retrogenes
retro_cfam_1923, retro_cfam_2028,
Erinaceus europaeus ENSEEUG00000006073 possible_ortholog 1 retrogene
retro_eeur_47,
Echinops telfairi ENSETEG00000004759 possible_ortholog 1 retrogene
retro_etel_2124,
Macropus eugenii ENSMEUG00000002558 ortholog_one2one 1 retrogene
retro_meug_43,
Mus musculus ENSMUSG00000022841 ortholog_one2one 2 retrogenes
retro_mmus_1873, retro_mmus_1914,
Oryctolagus cuniculus ENSOCUG00000024334 within_species_paralog 1 retrogene
retro_ocun_1089,
Otolemur garnettii ENSOGAG00000012286 ortholog_one2one 1 retrogene
retro_ogar_1110,
Rattus norvegicus ENSRNOG00000001709 ortholog_one2one 1 retrogene
retro_rnor_2342,
Tarsius syrichta ENSTSYG00000006101 possible_ortholog 1 retrogene
retro_tsyr_1873,
Tursiops truncatus ENSTTRG00000008493 ortholog_one2one 1 retrogene
retro_ttru_522,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_98 97.93 100.00
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Download FASTA sequences of all ENSOCUG00000004556 retrocopies