Parental gene:

CCNC, ENSOCUG00000003309

Aliases:None
Description:cyclin C [Source:HGNC Symbol;Acc:1581]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:12:87180020..87211878(-)


>ENSOCUG00000003309
ATGGCAGGGAACTTTTGGCAGAGCTCCCACTATTTGCAGTGGATTTTGGATAAACAAGATCTGTTGAAGGAGCGCCAAAA
GGACTTAAAATTTCTCTCAGAAGAAGAATATTGGAAATTACAAATATTTTTTACAAATGTTATCCAAGCATTAGGTGAGC
ATCTTAAATTAAGACAACAAGTTATTGCCACTGCTACGGTCTATTTCAAGAGATTCTATGCCAGGTATTCTCTGAAAAGT
ATAGATCCTGTATTAATGGCTCCTACATGTGTGTTTTTGGCATCCAAAGTAGAGGAATTTGGAGTAGTCTCAAATACAAG
ATTGATTTCTGCTGCTACTTCTGTATTAAAAACTAGATTTTCATATGCCTTTCCAAAGGAATTTCCTTATAGGATGAATC
ATATATTAGAATGTGAATTCTATCTTTTAGAACTAATGGATTGTTGCTTGATAGTGTATCATCCTTATAGACCTTTGCTC
CAGTATGTGCAGGACATGGGCCAAGAAGACATGTTGCTTCCCCTTGCATGGAGGATAGTGAATGATACCTACAGAACGGA
TCTTTGTCTACTGTATCCTCCTTTCATGATAGCTTTAGCTTGCCTTCATGTAGCCTGTGTCGTGCAGCAGAAAGATGCCA
GACAGTGGTTTGCTGAACTTTCTGTGGATATGGAAAAGATTTTGGAAATTATCAGGGTTATTTTAAAATTATATGAACAG
TGGAAGAATTTTGATGAGAGGAAAGAGATGGCAACAATTCTTAGTAAGATGCCGAAACCAAAACCACCTCCAAACAGTGA
AGGAGAGCAGGGTCCAAATGGAAGTCAGAACTCTAGCTACAGCCAATCTTAA

Library Parental gene expression (RPM)
SRP017611_brain 13 .25 RPM
SRP017611_kidney 16 .42 RPM
SRP017611_liver 5 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008954 ortholog_one2one 1 retrogene
retro_amel_1828,
Canis familiaris ENSCAFG00000003525 ortholog_one2one 1 retrogene
retro_cfam_1774,
Dasypus novemcinctus ENSDNOG00000011999 ortholog_one2many 3 retrogenes
retro_dnov_1153, retro_dnov_216, retro_dnov_2243,
Dipodomys ordii ENSDORG00000008393 ortholog_one2one 2 retrogenes
retro_dord_230, retro_dord_75,
Myotis lucifugus ENSMLUG00000012815 ortholog_one2one 1 retrogene
retro_mluc_1582,
Ochotona princeps ENSOPRG00000012972 ortholog_one2one 2 retrogenes
retro_opri_1026, retro_opri_151,
Sus scrofa ENSSSCG00000004353 ortholog_one2one 1 retrogene
retro_sscr_760,
Tupaia belangeri ENSTBEG00000017525 ortholog_one2one 1 retrogene
retro_tbel_677,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_888 77.42 53.36
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2. retro_ocun_1753 72.65 85.87
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Download FASTA sequences of all ENSOCUG00000003309 retrocopies