Parental gene:

CCNC, ENSCAFG00000003525

Aliases:None
Description:cyclin C [Source:HGNC Symbol;Acc:1581]
Organism:Dog (Canis familiaris)
Coordinates:12:57739772..57759807(-)


>ENSCAFG00000003525
AGTGGAATTTTTTCAGAGCATATTTACATTCATTATTTGCAATGGATTTTGGATAAACAAGATCTGTTGAAGGAACGCCA
GAAGGATTTAAAGTTTCTCTCAGAAGAAGAGTATTGGAAATTACAAATATTTTTTACAAATGTTATTCAGGCATTAGGTG
AACATCTTAAATTAAGACAACAAGTTATTGCCACTGCTACGGTCTATTTCAAGAGATTCTATGCCAGGTATTCTCTGAAA
AGTATAGATCCTGTATTAATGGCTCCTACATGTGTGTTTTTGGCATCCAAAGTAGAGGAATTTGGAGTAGTCTCAAATAC
AAGATTGATTTCTGCTGCTACTTCTGTATTAAAAACTAGATTTTCATATGCCTTTCCAAAGGAATTTCCTTATAGGATGA
ACCATATATTAGAATGTGAATTCTATCTTTTAGAACTAATGGATTGTTGCTTGATAGTGTATCATCCTTATAGACCTTTG
CTCCAGTATGTGCAGGACATGGGCCAAGAAGACATGTTGCTTCCCCTTGCATGGAGGATAGTGAATGATACCTACAGAAC
GGATCTTTGCCTACTGTATCCTCCTTTCATGATAGCTTTAGCTTGTCTACATGTAGCTTGTGTTGTTCAGCAGAAAGATG
CCAGACAGTGGTTTGCTGAGCTTTCTGTGGATATGGAGAAGATTTTGGAAATAATCAGGGTTATTTTAAAACTGTATGAG
CAGTGGAAGAATTTTGATGAGCGAAAAGAGATGGCAACTATTCTTAGTAAGATGCCGAAACCAAAACCTCCTCCAAACAG
TGAAGGAGAGCAGGGTCCAAATGGAAGTCAGAACTCTAGCTACAGCCAATCTTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 14 .83 RPM
SRP017611_brain 9 .84 RPM
SRP017611_kidney 27 .14 RPM
SRP017611_liver 8 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008954 ortholog_one2one 1 retrogene
retro_amel_1828,
Dasypus novemcinctus ENSDNOG00000011999 ortholog_one2many 3 retrogenes
retro_dnov_1153, retro_dnov_216, retro_dnov_2243,
Dipodomys ordii ENSDORG00000008393 ortholog_one2one 2 retrogenes
retro_dord_230, retro_dord_75,
Myotis lucifugus ENSMLUG00000012815 ortholog_one2one 1 retrogene
retro_mluc_1582,
Oryctolagus cuniculus ENSOCUG00000003309 ortholog_one2one 2 retrogenes
retro_ocun_1753, retro_ocun_888,
Ochotona princeps ENSOPRG00000012972 ortholog_one2one 2 retrogenes
retro_opri_1026, retro_opri_151,
Sus scrofa ENSSSCG00000004353 ortholog_one2one 1 retrogene
retro_sscr_760,
Tupaia belangeri ENSTBEG00000017525 ortholog_one2one 1 retrogene
retro_tbel_677,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1774 98.00 70.07
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Download FASTA sequences of all ENSCAFG00000003525 retrocopies