Parental gene:

SLC25A4, ENSOCUG00000002594

Aliases:SLC25A4, SLC25A5
Description:solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 (SLC25A4), nuclear gene encoding mitochondrial protein, mRNA [Source:RefSeq mRNA;Acc:NM_001082686]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:2:62603660..62656639(+)


>ENSOCUG00000002594
ATGAGTGATCAGGCTTTGAGCTTCCTCAAGGACTTCCTGGCAGGTGGCGTCGCCGCTGCCGTCTCCAAGACTGCGGTCGC
CCCCATCGAGAGGGTCAAACTGCTGCTGCAGGTCCAGCATGCCAGCAAACAGATCAGCGCTGAGAAGCAGTACAAAGGGA
TCATTGATTGTGTGGTGAGGATCCCCAAGGAGCAGGGCTTTCTCTCCTTCTGGAGGGGTAACCTGGCCAACGTGATCCGG
TACTTCCCCACCCAAGCTCTCAACTTCGCCTTCAAGGACAAGTACAAGCAGATCTTCTTGGGGGGCGTGGATCGGCATAA
GCAGTTCTGGCGCTACTTCGCTGGTAACCTGGCCTCCGGTGGGGCAGCTGGGGCCACCTCCCTCTGCTTTGTCTACCCGC
TGGACTTTGCCAGGACCAGGTTGGCTGCCGACGTGGGCAAGGGTGCCGCCCAGCGTGAGTTCAGTGGTCTGGGCAACTGT
CTCACCAAGATCTTCAAGTCTGATGGCCTGAGGGGTCTCTACCAGGGTTTCAATGTCTCTGTGCAAGGCATCATTATCTA
CAGAGCTGCCTACTTCGGAGTCTATGATACTGCCAAGGGGATGTTGCCTGACCCCAAGAACGTGCACATTATCGTGAGCT
GGATGATCGCCCAGACCGTGACGGCAGTGGCCGGGCTGGTGTCCTACCCCTTTGACACTGTTCGTCGTAGGATGATGATG
CAGTCTGGCCGGAAAGGGGCTGACATTATGTACACGGGGACAGTTGACTGCTGGAAGAAGATTGCAAAAGATGAAGGAGC
CAAGGCTTTCTTCAAAGGTGCCTGGTCCAATGTGTTGAGAGGCATGGGTGGCGCTTTTGTATTGGTGTTGTATGATGAGA
TCAAAAAATATGTCTAA

Library Parental gene expression (RPM)
SRP017611_brain 88 .14 RPM
SRP017611_kidney 124 .26 RPM
SRP017611_liver 25 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013208 ortholog_one2many 1 retrogene
retro_btau_1592,
Choloepus hoffmanni ENSCHOG00000010542 ortholog_one2many 3 retrogenes
retro_chof_1117, retro_chof_1777, retro_chof_807,
Dasypus novemcinctus ENSDNOG00000007258 ortholog_one2many 3 retrogenes
retro_dnov_1531, retro_dnov_1800, retro_dnov_390,
Dipodomys ordii ENSDORG00000013787 ortholog_one2many 1 retrogene
retro_dord_268,
Erinaceus europaeus ENSEEUG00000001021 ortholog_one2many 2 retrogenes
retro_eeur_274, retro_eeur_36,
Macropus eugenii ENSMEUG00000008508 ortholog_one2many 4 retrogenes
retro_meug_222, retro_meug_549, retro_meug_6, retro_meug_921,
Microcebus murinus ENSMICG00000010865 ortholog_one2many 1 retrogene
retro_mmur_1356,
Oryctolagus cuniculus ENSOCUG00000013268 within_species_paralog 11 retrogenes
retro_ocun_1002, retro_ocun_1233, retro_ocun_1457, retro_ocun_1694, retro_ocun_1705, retro_ocun_1862, retro_ocun_1877, retro_ocun_1890, retro_ocun_1932, retro_ocun_610, retro_ocun_708,
Ochotona princeps ENSOPRG00000005957 ortholog_one2many 6 retrogenes
retro_opri_1154, retro_opri_146, retro_opri_377, retro_opri_517, retro_opri_543, retro_opri_685,
Pan troglodytes ENSPTRG00000016646 ortholog_one2many 9 retrogenes
retro_ptro_146, retro_ptro_1588, retro_ptro_2143, retro_ptro_2364, retro_ptro_2388, retro_ptro_2517, retro_ptro_2525, retro_ptro_2819, retro_ptro_2882,
Pteropus vampyrus ENSPVAG00000015279 ortholog_one2many 1 retrogene
retro_pvam_892,
Sarcophilus harrisii ENSSHAG00000000932 ortholog_one2many 1 retrogene
retro_shar_160,
Tarsius syrichta ENSTSYG00000004233 ortholog_one2many 1 retrogene
retro_tsyr_27,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_102 100.00 100.00
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Download FASTA sequences of all ENSOCUG00000002594 retrocopies