Parental gene:

SLC25A4, ENSEEUG00000001021

Aliases:None
Description:solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:HGNC Symbol;Acc:10990]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_7899:31915..35367(+)


>ENSEEUG00000001021
ATGAGCGATCAAGCTTTGAGCTTCGTGAAGGACTTCCTGGCAGGCGGCGTCGCCGCTGCCGTCTCCAAGACTGCGGTCGC
CCCCATCGAGAGGGTCAAATTGCTGCTGCAGGTCCAGCATGCCAGCAAACAGATCAGTGCTGAGAAGCAGTACAAAGGGA
TCATTGATTGTATTGTGAGAATCCCTAAGGAGCAGGGCTTTGTCTCCTTCTGGAGGGGTAACCTGGCCAATGTCATTCGT
TACTTCCCCACCCAAGCCCTCAACTTCGCCTTCAAGGACAAGTACAAGCAGATCTTCCTGGGGGGTGTGGACAGGCATAA
GCAGTTCTGGCGCTACTTCGCTGGTAACCTGGCTTCTGGTGGAGCAGCCGGGGCCACCTCCCTCTGCTTTGTCTACCCAC
TGGACTTTGCTAGAACCCGGTTGGCTGCCGACGTGGGCAAGGGCTCTGCCCAGCGTGAGTTCAATGGTCTGGGCGACTGT
CTCACAAAGATCTTCAAGTCTGATGGCCTAAAGGGCCTCTACCAGGGTTTCAGCGTCTCTGTCCAAGGCATCATCATCTA
CAGAGCTGCCTATTTTGGAGTCTATGATACTGCCAAGGGGATGTTGCCTGACCCCAAGAATGTGCACATTATCGTGAGCT
GGATGATTGCCCAGAGTGTGACAGCAGTTGCAGGGCTGGTGTCCTACCCCTTTGATACTGTTCGCCGTAGGATGATGATG
CAGTCTGGCCGGAAAGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGGCATGGGTGGTGCTTTTGTATTGGTGTTGTATGATGAGA
TCAAAAAGTATGTCTAA

Library Parental gene expression (RPM)
SRP017611_brain 134 .39 RPM
SRP017611_kidney 128 .46 RPM
SRP017611_liver 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013208 ortholog_one2one 1 retrogene
retro_btau_1592,
Choloepus hoffmanni ENSCHOG00000010542 ortholog_one2one 3 retrogenes
retro_chof_1117, retro_chof_1777, retro_chof_807,
Dasypus novemcinctus ENSDNOG00000007258 ortholog_one2one 3 retrogenes
retro_dnov_1531, retro_dnov_1800, retro_dnov_390,
Dipodomys ordii ENSDORG00000013787 ortholog_one2one 1 retrogene
retro_dord_268,
Macropus eugenii ENSMEUG00000008508 ortholog_one2one 4 retrogenes
retro_meug_222, retro_meug_549, retro_meug_6, retro_meug_921,
Microcebus murinus ENSMICG00000010865 ortholog_one2one 1 retrogene
retro_mmur_1356,
Oryctolagus cuniculus ENSOCUG00000002594 ortholog_one2many 1 retrogene
retro_ocun_102,
Ochotona princeps ENSOPRG00000005957 ortholog_one2one 6 retrogenes
retro_opri_1154, retro_opri_146, retro_opri_377, retro_opri_517, retro_opri_543, retro_opri_685,
Pan troglodytes ENSPTRG00000016646 ortholog_one2one 9 retrogenes
retro_ptro_146, retro_ptro_1588, retro_ptro_2143, retro_ptro_2364, retro_ptro_2388, retro_ptro_2517, retro_ptro_2525, retro_ptro_2819, retro_ptro_2882,
Pteropus vampyrus ENSPVAG00000015279 ortholog_one2one 1 retrogene
retro_pvam_892,
Sarcophilus harrisii ENSSHAG00000000932 ortholog_one2one 1 retrogene
retro_shar_160,
Tarsius syrichta ENSTSYG00000004233 ortholog_one2one 1 retrogene
retro_tsyr_27,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_36 77.02 78.52
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2. retro_eeur_274 76.89 82.55
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Download FASTA sequences of all ENSEEUG00000001021 retrocopies