Parental gene:

ABCE1, ENSOCUG00000001821

Aliases:None
Description:ATP-binding cassette, sub-family E (OABP), member 1 [Source:HGNC Symbol;Acc:69]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:15:19534138..19556743(-)


>ENSOCUG00000001821
ATGGCGGACAAATTAACGAGAATTGCTATTGTCAACCATGACAAGTGTAAACCTAAGAAATGTCGACAGGAGTGCAAAAA
GAGTTGCCCTGTGGTTCGAATGGGAAAATTATGCATAGAGGTTACACCCCAGAGCAAAATAGCATGGATTTCTGAAACTC
TTTGTATTGGTTGTGGTATTTGTATTAAGAAATGCCCCTTTGGCGCCTTATCAATTGTCAATTTACCAAGCAACTTGGAA
AAAGAAACAACACATCGGTATTGTGCCAATGCCTTCAAACTTCACAGGTTACCTATCCCTCGTCCAGGTGAAGTTTTGGG
ATTAGTTGGAACTAATGGTATTGGAAAGTCAACTGCTTTAAAAATTTTAGCAGGGAAGCAGAAGCCAAACCTTGGAAAGT
ATGATGATCCTCCTGACTGGCAAGAAATTTTGACTTATTTCCGCGGCTCTGAGTTACAGAATTACTTTACCAAGATTCTG
GAAGATGACCTGAAAGCCATTATCAAACCTCAGTATGTAGACCAGATTCCCAAGGCTGCAAAGGGAACAGTTGGGTCTAT
TTTGGACAGAAAGGATGAAACAAAGACACAGGCAATTGTATGTCAACAGCTTGATTTAACCCACCTAAAAGAACGAAATG
TTGAAGATCTTTCAGGAGGAGAATTGCAAAGATTTGCTTGTGCGGTTGTTTGCATACAGAAAGCTGATATTTTCATGTTT
GATGAACCTTCTAGTTACTTAGATGTCAAGCAGCGATTAAAGGCTGCTATTACTATACGATCTTTAATAAACCCAGATAG
GTACATCATTGTGGTGGAGCATGATCTAAGTGTATTAGACTATCTCTCTGACTTCATCTGCTGTTTGTATGGTGTGCCAA
GCGCTTATGGTGTTGTAACTATGCCTTTTAGTGTTAGAGAAGGCATAAACATTTTCTTGGATGGCTATGTTCCAACAGAA
AACTTGAGATTCAGAGATGCATCGCTTGTTTTTAAAGTGGCTGAGACAGCAAATGAAGAAGAAGTTAAAAAGATGTGTAT
GTATAAATACCCAGGGATGAAGAAAAAGATGGGAGAGTTTGAGCTAGCAATTGTAGCTGGAGAGTTTACGGATTCTGAAA
TTATGGTGATGCTTGGGGAAAATGGTACAGGCAAAACGACATTCATCAGAATGCTTGCTGGAAGGCTTAAACCTGATGAA
GGAGGAGAAGTGCCAGTTCTAAATGTCAGTTATAAGCCACAAAAGATCAGTCCCAAATCAACTGGAAGTGTTCGCCAGTT
ATTACATGAAAAGATAAGAGATGCTTACACTCATCCGCAGTTTGTGACTGATGTAATGAAGCCTCTGCAGATTGAAAACA
TCATTGATCAAGAGGTGCAGACATTATCTGGAGGAGAACTACAGCGAGTAGCTTTAGCTCTTTGCTTGGGCAAACCTGCT
GATGTCTATTTAATTGATGAGCCATCTGCATATTTGGATTCTGAGCAAAGATTGATGGCAGCTCGAGTTGTCAAACGTTT
CATACTCCATGCGAAGAAGACGGCCTTTGTTGTGGAACATGACTTCATCATGGCCACCTATCTAGCAGATCGAGTCATCG
TTTTTGATGGTGTCCCATCTAAGAACACTGTTGCAAATAGTCCTCAAACCCTTTTGGCCGGCATGAATAAATTTTTGTCT
CAGCTTGAAATTACATTCAGAAGAGATCCAAACAACTATAGACCACGAATAAACAAACTCAACTCAATTAAGGATGTAGA
ACAGAAGAAGAGTGGAAACTACTTTTTCTTGGATGATTAG

Library Parental gene expression (RPM)
SRP017611_brain 61 .37 RPM
SRP017611_kidney 71 .76 RPM
SRP017611_liver 24 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004534 ortholog_one2one 1 retrogene
retro_chof_1280,
Cavia porcellus ENSCPOG00000007367 ortholog_one2one 1 retrogene
retro_cpor_289,
Homo sapiens ENSG00000164163 ortholog_one2one 1 retrogene
retro_hsap_3826,
Macaca mulatta ENSMMUG00000004433 ortholog_one2one 1 retrogene
retro_mmul_1628,
Mus musculus ENSMUSG00000058355 ortholog_one2one 1 retrogene
retro_mmus_1503,
Nomascus leucogenys ENSNLEG00000005460 ortholog_one2one 1 retrogene
retro_nleu_2125,
Procavia capensis ENSPCAG00000006183 ortholog_one2one 1 retrogene
retro_pcap_90,
Pongo abelii ENSPPYG00000015097 ortholog_one2one 1 retrogene
retro_pabe_3067,
Pan troglodytes ENSPTRG00000016481 ortholog_one2one 1 retrogene
retro_ptro_2603,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_668 95.38 57.76
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2. retro_ocun_1925 72.12 51.25
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Download FASTA sequences of all ENSOCUG00000001821 retrocopies