Parental gene:

RAB7A, ENSOCUG00000001645

Aliases:RAB7A, RAB7
Description:RAB7A, member RAS oncogene family (RAB7A), mRNA [Source:RefSeq mRNA;Acc:NM_001082034]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:9:7633584..7650746(+)


>ENSOCUG00000001645
ATGACCTCTCGGAAGAAAGTGTTGCTGAAGGTGATCATCTTGGGAGATTCTGGAGTTGGTAAGACATCACTCATGAACCA
GTACGTGAACAAGAAATTCAGTAACCAGTACAAAGCCACAATAGGAGCAGACTTTCTGACCAAGGAGGTGATGGTGGATG
ACAGGCTAGTTACGATGCAGATCTGGGACACAGCAGGACAGGAACGGTTCCAGTCTCTCGGTGTAGCCTTCTACAGAGGT
GCAGACTGCTGCGTTCTGGTATTCGACGTGACCGCCCCCAACACCTTCAAAACGCTTGATAGCTGGAGAGATGAGTTTCT
CATCCAGGCCAGTCCCCGGGATCCGGAAAACTTCCCCTTTGTTGTGTTGGGAAATAAGATCGACCTCGAAAACAGACAAG
TGGCCACAAAGAGGGCACAGGCCTGGTGCTACAGCAAAAACAACATTCCCTACTTCGAAACCAGTGCCAAGGAGGCCATC
AACGTGGAGCAGGCCTTCCAGACGATTGCACGGAATGCACTTAAACAGGAAACGGAGGTGGAACTGTACAATGAATTTCC
GGAACCCATCAAACTGGACAAGAACGACCGGGCCAAGACCTCCGCAGAAAGCTGCAGCTGCTGA

Library Parental gene expression (RPM)
SRP017611_brain 85 .21 RPM
SRP017611_kidney 109 .57 RPM
SRP017611_liver 42 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000365 ortholog_one2many 1 retrogene
retro_chof_13,
Felis catus ENSFCAG00000022971 ortholog_one2many 2 retrogenes
retro_fcat_661, retro_fcat_76,
Meleagris gallopavo ENSMGAG00000007208 ortholog_one2many 1 retrogene
retro_mgal_7,
Myotis lucifugus ENSMLUG00000008454 ortholog_one2many 1 retrogene
retro_mluc_1641,
Mustela putorius furo ENSMPUG00000017333 ortholog_one2many 1 retrogene
retro_mputfur_1169,
Mus musculus ENSMUSG00000079477 ortholog_one2many 2 retrogenes
retro_mmus_3339, retro_mmus_3546,
Pongo abelii ENSPPYG00000013431 ortholog_one2many 1 retrogene
retro_pabe_90,
Rattus norvegicus ENSRNOG00000012247 ortholog_one2many 1 retrogene
retro_rnor_2779,
Sarcophilus harrisii ENSSHAG00000016787 ortholog_one2many 1 retrogene
retro_shar_65,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_259 56.42 86.47
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Download FASTA sequences of all ENSOCUG00000001645 retrocopies