Parental gene:

RFK, ENSOCUG00000001622

Aliases:None
Description:riboflavin kinase [Source:HGNC Symbol;Acc:30324]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:1:62749020..62763820(-)


>ENSOCUG00000001622
ATGTTTAAGGAGCGAATGGAGCCAATGATCACGGACGGTCAACCTAGCGGGTGCTCAGCAGCTCAAAGAGTATCTTGCTT
TGGCATCAGGTTTGTAATGAAAAGCTGGGAAACAAAAGAAACATCGAGGACTAGGAACGGTACTTTCGCAGTGCTCTGGC
TGAAAATGCGGTTCCTCCAACGGCGTCTGGAAGCGGGAAGCAGAAGGAAGCCGGAGACGGGGCGGAAGGGAGCGAGCTGG
GGGCGGGGCCACGGCGGGGCGGGGCCACGGCGGGGCGGACTACGGAAGCCGAGCGGGCACAGCGGTTCTGCAGAGGAAGT
GTGCGTGTGCCGGCGGCGCGGGGGCCAGGTTTTGAGTCTTCTTGCGCGGTCGGGCGGTCACACCCGCGCTTACTTCTGCC
GTTGCGGCAGCTCTCGCGGCGGAGACGCAGTGCCTGAGTCGCTTGGCTCTTCTGTTGGGTCAGCGACGCGAGGGACCCAC
CGCGGCGTGTCGTCGGTGCCTCCCGGCCGGTGGTGCACCTACCCGGCCGGCCGGCAGAGCCCCCGCCCGTGTCCGCCGGC
TGGTCCGGGGGATCCGGGCACCGCCTCCACGGCGGCTCCGCCGGACGCGCGGACCGGCCCCCAGCCCGAGCCCCGAGTGG
ACGGCGTCATGAGGCACCTGCCGTACTTCTGCCGGGGCCAAGTGGTGCGGGGCTTCGGCCGCGGCTCCAAGCAGCTGGGC
ATCCCCACAGCTAACTTCCCTGAACAAGTCGTAGACAGCCTTCCGGCCGATTTCTCCACCGGCATTTATTATGGCTGGGC
CAGCGTTGGAAGTGGAGATGTCCATAAGATGGTGGTGAGCATAGGCTGGAACCCATACTACAAGAATGTAAAGAAGTCCA
TGGAAACTCACATCATACATACCTTCAAAGAGGACTTTTATGGGGAAATCCTCAATGTGGCCATTGTTGGCTATCTTAGA
CCAGAAAAAAACTTTGATTCTTTAGAATCACTTATTTCAGCAATTCAAGGTGATATTGAAGAAGCTAAGAAACGACTCGA
TTTACCAGAACATTTGAAACTCAAAGAAGATAATTTCTTCCAGGTTCCTAAAAACAAAATAATGAATGGCCACTGA

Library Parental gene expression (RPM)
SRP017611_brain 55 .41 RPM
SRP017611_kidney 40 .54 RPM
SRP017611_liver 6 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000031816 possible_ortholog 3 retrogenes
retro_cjac_2553, retro_cjac_4032, retro_cjac_654,
Erinaceus europaeus ENSEEUG00000015769 ortholog_one2one 1 retrogene
retro_eeur_425,
Gorilla gorilla ENSGGOG00000010358 possible_ortholog 1 retrogene
retro_ggor_339,
Macropus eugenii ENSMEUG00000000988 ortholog_one2one 6 retrogenes
retro_meug_1179, retro_meug_1815, retro_meug_1922, retro_meug_2144, retro_meug_268, retro_meug_698,
Monodelphis domestica ENSMODG00000001904 ortholog_one2many 2 retrogenes
retro_mdom_1404, retro_mdom_194,
Mus musculus ENSMUSG00000024712 ortholog_one2one 1 retrogene
retro_mmus_3439,
Otolemur garnettii ENSOGAG00000013120 ortholog_one2one 5 retrogenes
retro_ogar_1435, retro_ogar_1475, retro_ogar_3257, retro_ogar_725, retro_ogar_735,
Pongo abelii ENSPPYG00000019302 possible_ortholog 5 retrogenes
retro_pabe_1224, retro_pabe_1622, retro_pabe_1763, retro_pabe_217, retro_pabe_2289,
Rattus norvegicus ENSRNOG00000022273 ortholog_one2one 5 retrogenes
retro_rnor_1099, retro_rnor_1899, retro_rnor_2212, retro_rnor_2828, retro_rnor_2863,
Sarcophilus harrisii ENSSHAG00000015887 ortholog_one2many 3 retrogenes
retro_shar_79, retro_shar_85, retro_shar_99,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_591 71.43 53.37
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Download FASTA sequences of all ENSOCUG00000001622 retrocopies