Parental gene:

Rpl31, ENSMUSG00000073702

Aliases:None
Description:ribosomal protein L31 [Source:MGI Symbol;Acc:MGI:2149632]
Organism:Mouse (Mus musculus)
Coordinates:1:39367850..39371908(+)


>ENSMUSG00000073702
ATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAGAAGGGCCGTTCTGCCATCAACGAGGTGGTGACCCGAGAATACACCAT
CAACATTCACAAGCGCATCCATGGAGTGGGCTTCAAGAAGCGTGCTCCTCGGGCACTCAAAGAAATTCGGAAGTTTGCCA
TGAAGGAAATGGGGACACCAGATGTGCGCATTGACACCAGGCTCAATAAAGCCGTCTGGGCCAAGGGAATAAGGAACGTT
CCATATCGCATCCGAGTACGCTTGTCCAGAAAACGTAATGAGGATGAGGATTCCCCAAACAAGCTCTACACGCTGGTAAC
TTACGTGCCTGTTACCACATTCAAAAATCTACAGACGGTCAACGTGGATGAGAACTAA

Library Parental gene expression (RPM)
SRP007412_brain 69 .15 RPM
SRP007412_cerebellum 44 .55 RPM
SRP007412_heart 65 .62 RPM
SRP007412_kidney 77 .00 RPM
SRP007412_liver 55 .14 RPM
SRP007412_testis 58 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019701 possible_ortholog 9 retrogenes
retro_btau_1043, retro_btau_1100, retro_btau_1553, retro_btau_160, retro_btau_1777, retro_btau_1783, retro_btau_409, retro_btau_524, retro_btau_867,
Latimeria chalumnae ENSLACG00000013603 ortholog_one2one 1 retrogene
retro_lcha_94,
Macropus eugenii ENSMEUG00000000963 ortholog_one2one 8 retrogenes
retro_meug_1083, retro_meug_1433, retro_meug_1731, retro_meug_1741, retro_meug_198, retro_meug_418, retro_meug_588, retro_meug_649,
Microcebus murinus ENSMICG00000016059 ortholog_one2one 15 retrogenes
retro_mmur_1018, retro_mmur_1028, retro_mmur_1080, retro_mmur_130, retro_mmur_1320, retro_mmur_1369, retro_mmur_1386, retro_mmur_1606, retro_mmur_1617, retro_mmur_476, retro_mmur_506, retro_mmur_538, retro_mmur_639, retro_mmur_796, retro_mmur_996,
Myotis lucifugus ENSMLUG00000002507 possible_ortholog 21 retrogenes
retro_mluc_1072, retro_mluc_1135, retro_mluc_1239, retro_mluc_1301, retro_mluc_1406, retro_mluc_1470, retro_mluc_1666, retro_mluc_1678, retro_mluc_1896, retro_mluc_1913, retro_mluc_2028, retro_mluc_2124, retro_mluc_2126, retro_mluc_269, retro_mluc_303, retro_mluc_463, retro_mluc_767, retro_mluc_782, retro_mluc_914, retro_mluc_922, retro_mluc_997,
Oryctolagus cuniculus ENSOCUG00000002392 ortholog_one2one 9 retrogenes
retro_ocun_1070, retro_ocun_1074, retro_ocun_1161, retro_ocun_117, retro_ocun_1366, retro_ocun_206, retro_ocun_64, retro_ocun_941, retro_ocun_99,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_367 69.60 100.00
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2. retro_mmus_396 78.74 100.00
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3. retro_mmus_446 80.34 92.80
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4. retro_mmus_453 97.60 100.00
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5. retro_mmus_485 100.00 100.00
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6. retro_mmus_592 73.81 66.40
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7. retro_mmus_933 96.00 100.00
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8. retro_mmus_964 93.60 100.00
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9. retro_mmus_1054 96.80 100.00
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10. retro_mmus_1143 83.33 99.20
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11. retro_mmus_1256 79.20 100.00
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12. retro_mmus_1419 100.00 100.00
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13. retro_mmus_1456 59.62 83.20
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14. retro_mmus_1495 98.40 100.00
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15. retro_mmus_1507 50.48 81.60
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16. retro_mmus_1532 83.33 100.00
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17. retro_mmus_1598 89.68 100.00
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18. retro_mmus_1670 73.73 94.40
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19. retro_mmus_1674 60.71 66.40
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20. retro_mmus_1768 69.57 91.20
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21. retro_mmus_1823 93.60 100.00
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22. retro_mmus_1836 88.10 100.00
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23. retro_mmus_1856 62.89 74.40
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24. retro_mmus_2054 58.68 96.00
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25. retro_mmus_2152 92.00 100.00
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26. retro_mmus_2240 66.67 96.00
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27. retro_mmus_2278 97.62 100.00
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28. retro_mmus_2398 96.00 100.00
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29. retro_mmus_2554 71.30 89.60
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30. retro_mmus_2603 82.54 100.00
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31. retro_mmus_2620 82.47 76.80
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32. retro_mmus_2630 79.37 100.00
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33. retro_mmus_2658 82.20 93.60
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34. retro_mmus_2677 79.12 72.00
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35. retro_mmus_2716 72.36 97.60
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36. retro_mmus_2821 88.10 100.00
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37. retro_mmus_2959 69.52 83.20
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38. retro_mmus_2966 69.23 81.60
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39. retro_mmus_3186 85.71 95.20
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40. retro_mmus_3196 68.00 100.00
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41. retro_mmus_3380 84.92 100.00
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Download FASTA sequences of all ENSMUSG00000073702 retrocopies