Parental gene: | Ppih, ENSMUSG00000060288 |
| Aliases: | Ppih, 1100001J08Rik, 2010111B15Rik, 4833408F11Rik, AI464484, CYP-20, CYPH, D4Wsu43e |
| Description: | peptidyl prolyl isomerase H [Source:MGI Symbol;Acc:MGI:106499] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 4:119300009..119320546(-) |
>ENSMUSG00000060288
ATGGCGGTGGCAAATTCAAGTCCAGTCAATCCAGTGGTCTTCTTCGATGTCAGCATTGGCGGCCAGGAAGTTGGTCGCAT
GAAAATCGAGCTCTTTGCAGACGTGGTGCCTAAGACGGCAGAGAACTTTAGGCAATTCTGCACCGGAGAGTTCAGAAAAG
ATGGCGTTCCGATAGGATACAAAGGAAGCACCTTCCACAGGGTCATAAAGGATTTCATGATTCAGGGTGGAGATTTTGTT
AATGGCGATGGCACTGGAGTCGCCAGTATTTACCGGGGTCCATTTGCGGATGAAAATTTTAAACTTAGACACTCTGCTCC
AGGCCTGCTTTCCATGGCAAACAGTGGTCCCAGTACAAATGGCTGCCAGTTCTTTATCACGTGTTCTAAGTGTGATTGGC
TGGATGGAAAGCATGTAGTGTTTGGAAAAATCATTGACGGACTTCTAGTGATGAGGAAGATCGAGTTCCAGGCTCCTTTG
GGAAAGAGAGTTCAAGCTTGGACCCATTCATTAACCTGCCCAGCACTTACTGGGATTTTGGCTCTGATCCTGATGCCCAC
TGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 4 .30 RPM |
| SRP007412_cerebellum | 4 .82 RPM |
| SRP007412_heart | 3 .14 RPM |
| SRP007412_kidney | 5 .41 RPM |
| SRP007412_liver | 3 .66 RPM |
| SRP007412_testis | 10 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000003145 | possible_ortholog | 5 retrogenes | |
| Macropus eugenii | ENSMEUG00000001691 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000013129 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000013966 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014937 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000011139 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000008489 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_749 | 100.00 | 100.00 | Please wait, loading  |
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| 2. | retro_mmus_913 | 93.70 | 71.75 | Please wait, loading |
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| 3. | retro_mmus_977 | 91.18 | 76.84 | Please wait, loading |
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| 4. | retro_mmus_2563 | 100.00 | 100.00 | Please wait, loading |
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| 5. | retro_mmus_2873 | 98.87 | 100.00 | Please wait, loading |
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| 6. | retro_mmus_3195 | 80.45 | 100.00 | Please wait, loading |
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| 7. | retro_mmus_3709 | 60.61 | 52.66 | Please wait, loading |
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Download FASTA sequences of all ENSMUSG00000060288 retrocopies