Parental gene:

Hadhb, ENSMUSG00000059447

Aliases:Hadhb, 4930479F15Rik, Mtpb, TP-beta
Description:hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit [Source:MGI Symbol;Acc:MGI:2136381]
Organism:Mouse (Mus musculus)
Coordinates:5:30155247..30184593(+)


>ENSMUSG00000059447
ATGACTACCATCTTGACTTCCACTTTTAGAAACTTGTCAACTACATCAAAATGGGCTCTCAGATCTTCTATAAGACCTCT
GAGCTGTTCTTCCCAACTGCACTCTGCCCCAGCTGTCCAGACCAAGTCAAAGAAGACTTTAGCAAAACCCAATATGAAGA
ATATTGTGGTGGTGGAAGGGGTCCGCATTCCATTTCTGCTGTCAGGCACTTCGTATAAAGACCTAATGCCACATGACTTG
GCTAGAGCTGCACTTTCGGGTTTGTTGCATCGGACCAATATTCCAAAGGATGTTGTTGATTATATCATCTTTGGTACAGT
TATTCAGGAAGTGAAAACAAGCAATGTGGCTAGAGAGGCTGCCCTGGGAGCTGGCTTCTCTGATAAGACTCCAGCTCACA
CTGTCACCATGGCTTGTATCTCTTCAAACCAAGCCATGACCACAGCTGTTGGTCTGATAGCTTCTGGCCAGTGTGATGTC
GTCGTGGCTGGTGGTGTTGAGTTAATGTCTGATGTCCCTATTCGTCATTCAAGAAATATGAGGAAAATGATGCTTGATCT
CAATAAAGCCAAGACTCTGGGCCAGCGCCTGTCCTTACTCAGTAAATTCAGATTGAATTTTCTGTCCCCTGAGCTCCCTG
CAGTGGCTGAGTTCTCCACTAATGAGACCATGGGCCACTCTGCAGACCGACTGGCTGCTGCCTTTGCTGTTTCTCGAATG
GAACAGGATGAATATGCACTGCGTTCTCATAGTCTGGCCAAGAAGGCACAGGATGAAGGACACCTTTCTGATATTGTACC
CTTCAAAGTACCAGGAAAGGACACAGTTACCAAAGATAATGGGATCCGTCCTTCCTCACTGGAGCAAATGGCCAAACTAA
AACCTGCGTTCATCAAACCCTATGGCACAGTGACAGCTGCAAATTCTTCTTTCCTGACTGATGGCGCTTCTGCGATGCTA
ATCATGTCAGAGGACAGAGCTCTGGCCATGGGTTATAAACCAAAGGCATATTTGAGGGATTTTATATATGTGTCCCAGGA
TCCGAAAGATCAGCTTTTACTCGGACCAACATATGCTACTCCAAAAGTTTTAGAAAAGGCAGGGTTAACCATGAATGATA
TCGATGCTTTTGAATTTCATGAAGCCTTCTCAGGCCAGATTTTAGCTAACTTTAAAGCCATGGATTCTGATTGGTTTGCA
CAAAACTACATGGGTAGGAAAACCAAGGTTGGATCACCTCCTCTGGAGAAGTTTAATATCTGGGGCGGATCACTGTCTCT
GGGGCACCCTTTTGGAGCCACTGGCTGTCGGCTGGTCATGGCAGCTGCCAACAGACTGAGGAAGGATGGAGGCCAGTATG
CTTTAGTGGCTGCCTGTGCAGCTGGAGGACAGGGTCATGCTATGATTGTGGAAGCTTACCCCAAATGA

Library Parental gene expression (RPM)
SRP007412_brain 18 .41 RPM
SRP007412_cerebellum 15 .37 RPM
SRP007412_heart 370 .36 RPM
SRP007412_kidney 132 .90 RPM
SRP007412_liver 43 .61 RPM
SRP007412_testis 37 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002288 ortholog_one2many 1 retrogene
retro_amel_1473,
Canis familiaris ENSCAFG00000029395 ortholog_one2many 1 retrogene
retro_cfam_2114,
Choloepus hoffmanni ENSCHOG00000010050 ortholog_one2one 3 retrogenes
retro_chof_122, retro_chof_1869, retro_chof_911,
Homo sapiens ENSG00000138029 ortholog_one2one 1 retrogene
retro_hsap_4778,
Gorilla gorilla ENSGGOG00000025829 ortholog_one2one 1 retrogene
retro_ggor_2976,
Microcebus murinus ENSMICG00000006750 ortholog_one2one 1 retrogene
retro_mmur_1315,
Otolemur garnettii ENSOGAG00000005444 ortholog_one2many 1 retrogene
retro_ogar_167,
Pongo abelii ENSPPYG00000012582 ortholog_one2one 1 retrogene
retro_pabe_3718,
Pan troglodytes ENSPTRG00000011733 ortholog_one2one 1 retrogene
retro_ptro_3180,
Tarsius syrichta ENSTSYG00000003570 ortholog_one2one 2 retrogenes
retro_tsyr_1316, retro_tsyr_1951,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1427 95.18 100.00
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2. retro_mmus_1961 99.79 100.00
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Download FASTA sequences of all ENSMUSG00000059447 retrocopies