Parental gene:

Ublcp1, ENSMUSG00000041231

Aliases:Ublcp1, 4930527B16Rik, 8430435I17Rik, BC002236
Description:ubiquitin-like domain containing CTD phosphatase 1 [Source:MGI Symbol;Acc:MGI:1933105]
Organism:Mouse (Mus musculus)
Coordinates:11:44454570..44470498(-)


>ENSMUSG00000041231
ATGGCACTCCCCATCATAGTGAAATGGGGTGGGCAGGAGTACTCAGTGACCACGCTCTCAGAAGATGATACTGTGCTGGA
TCTTAAACAGTTCCTCAAGACCCTTACGGGAGTGCTCCCAGAACGCCAGAAGTTACTAGGGCTCAAAGTTAAAGGCAAAC
CTGCAGAAAATGATGTTAAGCTTGGAGCTCTCAAACTGAAACCAAATACTAAAATCATGATGATGGGAACTCGAGAGGAG
AGCTTGGAAGATGTCTTATGTCCTCCTCCTGACAATGATGATGTCATCAATGATTTTGACATTGAAGATGAAGTAGTTGA
AGTAGAAAATAGGGAGGAAAACCTCCTGAAGGTCTCTCGCAGAGTCAAGGAGTACAAGGTGGAGGTGCTGAACCCTCCCC
GGGAGGGCAAGAAGCTCCTGGTGCTGGATGTTGACTATACACTGTTTGATCATAGGTCTTGTGCAGAGACTGGGGTAGAG
CTAATGAGACCATATCTTCATGAATTTCTAACATCTGCATATGAAGATTATGACATTGTTATTTGGTCTGCAACAAATAT
GAAGTGGATTGAAGCTAAAATGAAAGAGCTGGGCGTGAGCACAAATGCCAACTATAAGATTACCTTCATGCTGGACAGTG
CGGCCATGATCACTGTGCACACGCCCCGGAGAGGGCTCATTGACGTGAAGCCTCTTGGTGTCATTTGGGGAAAGTTTTCT
GAATTCTACAGCAAAAAGAACACCATTATGTTTGATGATATAGGAAGAAATTTTCTAATGAATCCACAAAATGGACTGAA
GATAAGGCCTTTCATGAAAGCTCATCTAAACCGTGATAAAGACAAGGAACTGGTGAAGCTCACTCAGTACCTCAAGGAGA
TCGCTAAGCTTGATGACTTCTTGGAGCTGAATCACAAGTACTGGGAGAGGTATCTATCAAAGAAGCAAGGACAGTAG

Library Parental gene expression (RPM)
SRP007412_brain 22 .59 RPM
SRP007412_cerebellum 26 .53 RPM
SRP007412_heart 14 .04 RPM
SRP007412_kidney 20 .37 RPM
SRP007412_liver 13 .44 RPM
SRP007412_testis 8 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007691 ortholog_one2many 1 retrogene
retro_chof_51,
Echinops telfairi ENSETEG00000000170 ortholog_one2one 1 retrogene
retro_etel_1142,
Microcebus murinus ENSMICG00000010060 ortholog_one2one 2 retrogenes
retro_mmur_1083, retro_mmur_1319,
Myotis lucifugus ENSMLUG00000006359 ortholog_one2one 1 retrogene
retro_mluc_1367,
Monodelphis domestica ENSMODG00000008063 ortholog_one2one 2 retrogenes
retro_mdom_1251, retro_mdom_1351,
Mustela putorius furo ENSMPUG00000013396 ortholog_one2one 1 retrogene
retro_mputfur_1098,
Oryctolagus cuniculus ENSOCUG00000002224 ortholog_one2one 1 retrogene
retro_ocun_1036,
Tupaia belangeri ENSTBEG00000008983 ortholog_one2many 1 retrogene
retro_tbel_41,
Tursiops truncatus ENSTTRG00000005876 ortholog_one2one 1 retrogene
retro_ttru_761,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_762 98.75 100.00
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Download FASTA sequences of all ENSMUSG00000041231 retrocopies