Parental gene:

Zc3h11a, ENSMUSG00000026464

Aliases:Zc3h11a, 1110003F06Rik, 5730454B08Rik, G630041M05Rik, Zc3hdc11a, Zc3hh11a, mKIAA0663
Description:zinc finger CCCH type containing 11A [Source:MGI Symbol;Acc:MGI:1917829]
Organism:Mouse (Mus musculus)
Coordinates:1:133619870..133661380(-)


>ENSMUSG00000026464
ATGCCTAATCAGGGAGAAGACTGCTATTTTTATTTCTATTCTACATGCGCCAAAGGTGACAGCTGCCCATTCCGTCACTG
TGAAGCTGCACTAGGAAATGAAACTGTTTGCACACTATGGCAAGAAGGTCGTTGTTTTCGACAGGTGTGCAGATTTCGTC
ACATGGAAATTGACAAAAAACGAAGTGAAATTCCTTGTTATTGGGAAAATCAGCCAGTGGGATGTCAAAAACTAAACTGC
GCTTTCCATCACACCAGAAGCCGCTATGTTGATGGACTCTTCCTACCTCCAAGCAAAACTGTGTTACCCACTGTGCCTGA
GTCACAAGAAGAAGAAGTAAAGACTAGCCAGCTCACAGTTCAACAGAGCAAATTGTCTGTTCAGTCTAACCCCTCCCCTC
AGCTGCGGAGTGTAATGAAAGTAGAGAGCTCAGAAAACGTTCCCAGCCCCACACATCCGCCTGTTGTAATCAACGCTGCA
GATGATGATGAAGATGACGATGATCAGTTTTCTGAGGAGGGTGATGAAAGCAAGACACCTGCCCTGCAGCCATCTCCTGA
CGTCCATAATGGATTACGAGTGGCTTCTGCCCGCAAACCTGGAGTCAGTTTAAAGCAAGGTGAATGTTTGAATTTTGGAA
TAAAGACTCTTGAGGAAATTAAATCAAAGAAAATGAAGGAAAAATCCAAGAAGCAAGGTGAAGGCTCCTCGGGAGTTTCC
AGTGTTTTACAGCAGCCTCAGCCCAATCCAGGCCCTGAGAAGGAGAATGTTCGGACTGTGGTGAGGATGGTGACTCTATC
CAGCAAACCAGAAGAGCCCTTGGTTAGACTGAGTCTTTCTGAGAGACTGGGGAAACGAAAACTTTCAGTGGGTGGTGATA
GTGACCCTCCATTAAAGCGAAGCCTTGCACAGAGGCTGGGAAAAAAAGTGGAATCGCCAGAAACTAACATTGATAAAGCA
CCAAAGAAAGAGCGAGGTCATAAAGCTGGGGAGATCCATGTGAAGACACTGGAAGAAATTCTTCTTGAAAGAGCCAGTCA
GAAACGTGGAGAATTGCAAACCAAACTGAAGGCAGAAGAACCTTCAGGAGCCGATGATTCTCCATCAGGGACAAAAAGTT
CTTCTTCAGTGCGGATCAAAACCTTCTCTGAGGTCCTGGCTGAAAAGAAACACCGGCAGCAGGAAATGGAAAGACAGAAA
TCCAAAAAGGATACAAGTTGCCTCACGCTAACAGACGACACTGAAATGAAAAAGACAGTGAGTCTGCCCACTGTTGCTGT
TAGCAAAGGACAACCAGAGGAGCCTGCAGGAAGAGCCAGGTCTATGCAGGAGGTGCATATTAAGACACTAGAGGAAATTA
AGCTGGAGAAGGCCCTGAGGGTGCAGCAAAGCTCTGAGAGTAGTGGCAACTCCCGACCTCAAGCTGAGGCTGCCCCAGGG
ACAAAGAGGCTGCTCCGCATCACCAAGAGAGCAGGTGTAAAAGAAGAGAAAAAATGTGGCCTTGAAGACAGTGGTGACCC
TCCTCAGAGCAGTGTGACTAAGATGGAGGCTAATGAGACTTCAGATGAGACCATAAGTGATCCCACAAAACTTGCAGTCA
ACAGATGTGACACTGTCAAAGAGAAACACACACAGAGACTGCAGGAGAGAGGAGCATCACAAAAGGAGAAAGCAGCCTTG
TCATCTGTGCGAGGAGATGAGGCTTCTTCTTATACCCGAGTGGCGGGGAAGCCGGTGCTCACTGCTGTATCAGGCGTCAC
TCGGCATCTGGCAAAACGGCTCCCCGTGGAGTCATCCCAGAAAGGGGAGGTAGAAACCTCCGGAATCGGGGACTCAATAC
TGAATGTGAAATGCGCAGCACAGACTTTGGAGAAGAGGAGTAAAGTCAAACCCAAAGTAAATGTGAAGCCATCTGTGGTC
AAGGTTGTCTCAGCTCCCAAATTGGCTCCCAAACGCAAGGCTGTGGAGATGCACTCTGCCGTCATCGCAGCCGTGAAGCC
GCTCAGCTCCAGCAGTGTCCTGCAGGAAAGCCCCACCAAGAAAGCAGCTGTGGCTGTTGTCCCACTCCTCTCTGAGGATA
AACCCGTCACCATGTCTGAGACAGAAAACCCAAAAGACAGTTCTGTGCTGTCTTCAGCCCAAGCTGCTTCGGAACCCTTG
CTCCCGGAAGGCTCTGGCCCTTCCTCATCCCAGACGGCAACAAAACCGCGCCGGCTGAGCTCCGCCTCCACGGGAAAGCC
TCCACTCTCTGTGGAAGATGATTTTGAGAAACTAATATGGGAAATTTCAGGGGGCAAATTGGAAGCTGAGATCGACTTGG
ATCCTGGGAAGGATGAAGATGACCTTCTGCTTGAGCTCTCAGAGATGATTGACAGCTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .02 RPM
SRP007412_cerebellum 0 .04 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .02 RPM
SRP007412_liver 0 .03 RPM
SRP007412_testis 0 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000058673 ortholog_one2one 2 retrogenes
retro_hsap_3481, retro_hsap_508,
Monodelphis domestica ENSMODG00000001184 ortholog_one2one 1 retrogene
retro_mdom_1449,
Otolemur garnettii ENSOGAG00000000243 ortholog_one2one 1 retrogene
retro_ogar_3250,
Pan troglodytes ENSPTRG00000001876 ortholog_one2one 5 retrogenes
retro_ptro_2980, retro_ptro_2981, retro_ptro_2991, retro_ptro_380, retro_ptro_382,
Rattus norvegicus ENSRNOG00000002993 ortholog_one2many 3 retrogenes
retro_rnor_1570, retro_rnor_1673, retro_rnor_602,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_564 79.68 71.46
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2. retro_mmus_3323 88.28 62.12
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Download FASTA sequences of all ENSMUSG00000026464 retrocopies