Parental gene:

ZC3H11A, ENSG00000058673

Aliases:ZC3H11A, ZC3HDC11A
Description:zinc finger CCCH-type containing 11A [Source:HGNC Symbol;Acc:29093]
Organism:Human (Homo sapiens)
Coordinates:1:203764781..203823252(+)


>ENSG00000058673
ATGCCTAATCAAGGAGAAGACTGCTATTTTTTTTTCTATTCCACATGTACCAAAGGTGACAGCTGCCCATTCCGTCACTG
TGAAGCTGCAATAGGAAATGAAACTGTTTGCACATTATGGCAAGAAGGGCGCTGTTTTCGACAGGTGTGCAGGTTTCGGC
ACATGGAGATTGATAAAAAACGCAGTGAAATTCCTTGTTATTGGGAAAATCAGCCAACAGGATGTCAAAAATTAAACTGC
GCTTTCCATCACAATAGAGGACGATATGTTGATGGCCTTTTCCTACCTCCGAGCAAAACTGTGTTGCCCACTGTGCCTGA
GTCACCAGAAGAGGAAGTGAAGGCTAGCCAACTTTCAGTTCAGCAGAACAAATTGTCTGTCCAGTCCAATCCTTCCCCTC
AGCTGCGGAGCGTTATGAAAGTAGAAAGTTCCGAAAATGTTCCTAGCCCCACGCATCCACCAGTTGTAATTAATGCTGCA
GATGATGATGAAGATGATGATGATCAGTTTTCTGAGGAAGGTGATGAAACCAAAACACCTACCCTGCAACCAACTCCTGA
AGTTCACAATGGATTACGAGTGACTTCTGTCCGGAAACCTGCAGTCAATATAAAGCAAGGTGAATGTTTGAATTTTGGAA
TAAAAACTCTTGAGGAAATTAAGTCAAAGAAAATGAAGGAAAAATCTAAGAAGCAAGGTGAGGGTTCTTCAGGAGTTTCC
AGTCTTTTACTCCACCCTGAGCCCGTTCCAGGTCCTGAAAAAGAAAATGTCAGGACTGTGGTGAGGACAGTAACTCTCTC
CACCAAACAAGGAGAAGAACCCTTGGTTAGATTGAGTCTTACTGAGAGACTGGGGAAACGAAAATTTTCAGCAGGCGGTG
ACAGTGATCCTCCATTAAAGCGTAGCCTGGCACAGAGGCTAGGGAAGAAAGTTGAAGCTCCAGAAACTAACATTGACAAA
ACACCAAAGAAAGCTCAAGTTTCCAAGTCTCTTAAGGAGCGATTAGGCATGTCAGCTGATCCAGATAATGAGGATGCAAC
AGATAAAGTTAATAAAGTTGGTGAGATCCATGTGAAGACATTAGAAGAAATTCTTCTTGAAAGAGCCAGTCAGAAACGTG
GAGAATTGCAAACTAAACTCAAGACAGAAGGACCTTCAAAAACTGATGATTCTACTTCAGGAGCAAGAAGCTCCTCCACT
ATCCGTATCAAAACCTTCTCTGAGGTCCTGGCTGAAAAAAAACATCGGCAGCAGGAAGCAGAGAGACAAAAAAGCAAAAA
GGATACAACTTGCATCAAGCTAAAGATTGATAGTGAAATTAAAAAAACAGTAGTTTTGCCACCCATTGTTGCCAGCAGAG
GACAATCAGAGGAGCCTGCAGGTAAAACAAAGTCTATGCAGGAGGTGCACATCAAGACGCTGGAAGAAATTAAACTGGAG
AAGGCACTGAGGGTGCAGCAGAGCTCTGAGAGCAGCACCAGCTCCCCGTCTCAACACGAGGCCACTCCAGGGGCAAGGCG
GCTGCTGCGAATCACCAAAAGAACAGGGATGAAAGAAGAGAAGAACCTTCAGGAAGGAAATGAAGTTGATTCTCAGAGCA
GTATTAGAACAGAAGCTAAAGAGGCTTCAGGTGAGACCACAGGAGTTGACATCACTAAAATTCAAGTCAAGAGATGTGAG
ACCATGAGAGAGAAGCACATGCAGAAACAGCAGGAGAGGGAAAAATCAGTCTTGACACCTCTTCGGGGAGATGTAGCCTC
TTGCAATACCCAAGTGGCAGAGAAACCAGTGCTCACTGCTGTGCCAGGAATCACACGGCACCTGACCAAGCGGCTTCCCA
CAAAGTCATCCCAGAAGGTGGAGGTAGAAACCTCAGGGATTGGAGACTCATTATTGAATGTGAAATGTGCAGCACAGACC
TTGGAAAAAAGGGGTAAAGCTAAACCCAAAGTGAACGTGAAGCCATCTGTGGTTAAAGTTGTGTCATCCCCCAAATTGGC
CCCAAAACGTAAGGCAGTGGAGATGCACGCTGCTGTCATTGCCGCTGTGAAGCCACTCAGCTCCAGCAGTGTCCTACAGG
AACCCCCAGCCAAAAAGGCAGCTGTGGCTGTTGTCCCGCTTGTCTCTGAGGACAAATCAGTCACTGTGCCTGAAGCAGAA
AATCCTAGAGACAGTCTTGTGCTGCCTCCAACCCAGTCCTCTTCAGATTCCTCACCCCCGGAGGTGTCTGGCCCTTCCTC
ATCCCAAATGAGCATGAAAACTCGCCGACTCAGCTCTGCCTCAACAGGAAAGCCCCCACTCTCTGTGGAGGATGATTTTG
AGAAACTAATATGGGAGATTTCAGGAGGCAAATTGGAAGCTGAGATTGACCTGGATCCTGGGAAAGATGAAGATGACCTT
CTGCTTGAGCTATCAGAAATGATTGATAGCTGA

Library Parental gene expression (RPM)
bodymap2_adipose 203 .15 RPM
bodymap2_adrenal 143 .59 RPM
bodymap2_brain 66 .85 RPM
bodymap2_breast 161 .25 RPM
bodymap2_colon 128 .93 RPM
bodymap2_heart 83 .50 RPM
bodymap2_kidney 130 .45 RPM
bodymap2_liver 52 .89 RPM
bodymap2_lung 192 .18 RPM
bodymap2_lymph_node 235 .68 RPM
bodymap2_ovary 200 .17 RPM
bodymap2_prostate 138 .68 RPM
bodymap2_skeletal_muscle 90 .94 RPM
bodymap2_testis 171 .09 RPM
bodymap2_thyroid 153 .87 RPM
bodymap2_white_blood_cells 129 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Monodelphis domestica ENSMODG00000001184 ortholog_one2one 1 retrogene
retro_mdom_1449,
Mus musculus ENSMUSG00000026464 ortholog_one2one 2 retrogenes
retro_mmus_3323, retro_mmus_564,
Otolemur garnettii ENSOGAG00000000243 ortholog_one2one 1 retrogene
retro_ogar_3250,
Pan troglodytes ENSPTRG00000001876 ortholog_one2one 5 retrogenes
retro_ptro_2980, retro_ptro_2981, retro_ptro_2991, retro_ptro_380, retro_ptro_382,
Rattus norvegicus ENSRNOG00000002993 ortholog_one2many 3 retrogenes
retro_rnor_1570, retro_rnor_1673, retro_rnor_602,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_508 91.74 100.00
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2. retro_hsap_3481 91.86 100.00
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Download FASTA sequences of all ENSG00000058673 retrocopies