Parental gene:

Thoc3, ENSMUSG00000025872

Aliases:Thoc3, 2410044K02Rik, AL033344
Description:THO complex 3 [Source:MGI Symbol;Acc:MGI:1920916]
Organism:Mouse (Mus musculus)
Coordinates:13:54458836..54468849(-)


>ENSMUSG00000025872
ATGGCGGCGCCCGCTGCGGTCCTGGGCCCCTCGGCCCTCGGCCAGAGCGGCCCCGGCTCGATGGCGCCCTGGTGCTCAGT
GAGCAGTGGCCCGTCTCGTTACGTGCTCGGGATGCAGGAGCTCTTCCGAGGCCACAGCAAGACGCGCGAATTCCCGGCGC
ACAGTGCTAAGGTGCACTCGGTCGCCTGGAGCTGCGATGGCCGTCGCTTGGCCTCGGGGTCCTTCGACAAGACTGCCAGC
GTGTTCTTGCTGGAGAAGGACCGGCTGGTCAAAGAAAACAACTACCGGGGCCACGGAGATAGTGTGGACCAGCTTTGTTG
GCACCCAAGCAACCCTGACCTCTTTGTCACCGCATCTGGAGATAAAACCATTCGCATCTGGGATGTGAGGACTACAAAAT
GCATCGCCACTGTGAATACGAAAGGGGAGAACATTAACATCTGTTGGAGTCCCGACGGGCAGACCATCGCTGTGGGCAAC
AAGGACGACGTTGTGACTTTCATTGACGCCAAGACACACCGCTCCAAAGCGGAGGAGCAGTTCAAGTTTGAGGTCAATGA
GATCTCATGGAACAACGACAACAACATGTTCTTCCTGACCAACGGCAATGGTTGCATCAACATCCTCAGCTACCCAGAAT
TGAAGCCTGTGCAGTCCATCAATGCCCATCCTTCTAACTGCATCTGTATCAAGTTTGACCCCATGGGGAAATACTTTGCC
ACAGGAAGTGCAGATGCCTTGGTCAGCCTTTGGGACGTTGACGAGTTAGTGTGCGTGCGGTGCTTTTCCAGACTAGATTG
GCCTGTGAGGACCCTCAGTTTTAGCCACGATGGGAAAATGCTGGCATCGGCTTCGGAGGACCATTTCATTGATATAGCTG
AAGTCGAGACAGGAGACAAGCTATGGGAGGTGCAGTGTGAGTCCCCGACTTTCACTGTGGCTTGGCACCCCAAGAGGCCT
CTGCTGGCTTTTGCCTGTGATGACAAAGATGGCAAATACGACAGCAGTCGGGAGGCTGGAACTGTGAAGCTGTTTGGACT
TCCCAATGACTCCTGA

Library Parental gene expression (RPM)
SRP007412_brain 21 .24 RPM
SRP007412_cerebellum 21 .45 RPM
SRP007412_heart 13 .70 RPM
SRP007412_kidney 18 .50 RPM
SRP007412_liver 18 .46 RPM
SRP007412_testis 21 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006495 ortholog_one2one 2 retrogenes
retro_cjac_1571, retro_cjac_3072,
Macropus eugenii ENSMEUG00000001068 possible_ortholog 2 retrogenes
retro_meug_1061, retro_meug_19,
Monodelphis domestica ENSMODG00000005339 possible_ortholog 1 retrogene
retro_mdom_164,
Otolemur garnettii ENSOGAG00000003503 ortholog_one2one 1 retrogene
retro_ogar_3005,
Sarcophilus harrisii ENSSHAG00000010757 possible_ortholog 1 retrogene
retro_shar_4,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_441 86.78 68.09
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2. retro_mmus_1821 54.70 50.71
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Download FASTA sequences of all ENSMUSG00000025872 retrocopies