Parental gene: | Apex2, ENSMUSG00000025269 |
| Aliases: | Apex2, C430040P13Rik, ape2 |
| Description: | apurinic/apyrimidinic endonuclease 2 [Source:MGI Symbol;Acc:MGI:1924872] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | X:150519518..150589868(-) |
>ENSMUSG00000025269
ATGCTGCGCGTGGTAAGCTGGAACATCAATGGGATCCGGAGTCCCCTGCAAGGCCTTGCATGCCAGGAACCCAGCAGCTG
TCCCACGGCCTTGCGACGCGTTTTGGACGAGCTGGATGCTGATATTGTCTGTCTCCAGGAGACCAAAGTGACCAGAGATG
TACTGACAGAGCCCCTGGCTATTGTTGAGGGTTATAACTCCTATTTCAGCTTCAGCCGCAGCCGTAGTGGCTATTCTGGT
GTGGCTACCTTCTGTAAGGACAGTGCTACCCCAGTAGCTGCTGAAGAAGGCCTGAGTGGTGTGTTTGCCACCCTGAATGG
AGATATTGGTTGCTATGGAAACATGGATGAGTTCACGCAAGAGGAACTCCGGGTTCTGGATAGTGAGGGCCGGGCCCTCC
TTACACAGCACAAGATCCGCACATTGGAAGGGAAGGAGAAGACTTTGACCCTGATCAATGTGTACTGCCCTCACGCGGAT
CCTGGGAAGCCTGAGCGGCTGACCTTCAAGATGCGCTTCTATCGCCTGCTCCAGATGCGAGCAGAAGCGCTCCTGGCAGC
TGGCAGTCACGTGATAATCCTGGGGGACCTGAATACAGCCCACCGACCCATTGACCACTGCGATGCAAGTAGTCTGGAAT
GCTTTGAAGAGGACCCAGGGCGTAAGTGGATGGATGGCTTGCTCAGTAACCCAGGGGATGAGGCTGGACCCCACATAGGG
CTCTTCATGGATAGCTACCGCTACTTGCATCCAAAACAGCAGAGGGCTTTCACCTGCTGGTCAGTGGTCAGTGGTGCACG
CCATCTCAACTATGGCTCTAGACTTGACTATGTACTGGGAGATAGGGCCTTGGTCATAGATACCTTCCAGGCCTCCTTCT
TACTCCCTGAAGTGATGGGCTCTGACCACTGCCCTGTGGGAGCTGTCTTAAATGTATCCTGTGTGCCAGCAAAACAGTGC
CCAGCTCTGTGTACCCGCTTCCTCCCCGAGTTTGCAGGTACCCAGCTCAAGATTCTTCGCTTCCTAGTTCCTCTTGAGCA
AGAACCTGTGCGGGAACAGCAAGTCCTGCAGCCCAGCCATCAAATCCAGGCACAGAGACAGCCAAGAAAAGCCTTCATGC
ATTCAACCAGGCTTCGGAAAAGTCAAGGTGGCCCCAAAAGAAAACAGAAAAACCTGATGAGTTACTTCCAGCCTTCCTCC
AGCCTTTCCCAAACTTCTGGTGTGGAGCTGCCTACCCTGCCTCTGGTGGGCCCTCTTACAACCCCAAAGACTGCAGAAGA
GGTGGCAACAGCCACAATGCTAGAAGAGAAGAACAAGGTTCCAGAGTCCAAAGATGAGAAGGGAGAAAGGACTGCCTTCT
GGAAGTCTATGCTGAGTGGGCCCTCACCCATGCCCCTCTGTGGAGGCCACAGGGAGCCATGTGTGATGCGTACTGTGAAA
AAAACAGGACCCAACTTTGGTCGCCAGTTCTACATGTGTGCTAGACCCCGAGGTCCTCCCAGTGACCCCTCTTCCCGCTG
TAACTTCTTCCTCTGGAGCAGGCCCAGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 5 .28 RPM |
| SRP007412_cerebellum | 5 .17 RPM |
| SRP007412_heart | 5 .82 RPM |
| SRP007412_kidney | 9 .51 RPM |
| SRP007412_liver | 6 .80 RPM |
| SRP007412_testis | 1 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016584 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016298 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000035960 | within_species_paralog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000000166 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_2564 | 70.59 | 95.35 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSMUSG00000025269 retrocopies