Parental gene:

Lsm12, ENSMUSG00000020922

Aliases:None
Description:LSM12 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1919592]
Organism:Mouse (Mus musculus)
Coordinates:11:102162496..102185296(-)


>ENSMUSG00000020922
ATGGCGGCACCTCCGGGCGAGTACTTCAGCGTTGGGAGCCAGGTGTCGTGCCGGACGTGCCAGGAGCAGCGGCTGCAGGG
CGAGGTGGTAGCCTTCGACTACCAGTCCAAAATGCTGGCTCTAAAATGTCCCTCTTCCAGTGGAAAACCCAACCATGCAG
ACATCTTGCTTATAAACTTACAGTATGTTTCAGAAGTGGAAATAATTAATGATCGAACAGAAACCCCTCCTCCCCTAGCT
TCACTCAATGTTAGTAAGCTTGCCAGCAAAGCACGGACGGAGAAGGAGGAGAAGCTGAGCCAGGCCTATGCAATCAGCGC
TGGTGTCTCCCTGGAGGGCCAACAGCTCTTCCAGACCATTCACAAGACCATTAAAGACTGTAAATGGCAAGAAAAAAACA
TTGTAGTCATGGAAGAAGTTGTTATTACACCCCCATATCAAGTGGAAAATTGTAAAGGCAAAGAGGGGAGTGCACTGAGC
CATGTACGCAAAATAGTTGAAAAACATTTTAGAGACGTGGAAAGCCAAAAGATACTGCAGCGTTCACAAGCCCAACAACC
ACAGAAGGAGGCTGCTCTGTCATCCTGA

Library Parental gene expression (RPM)
SRP007412_brain 25 .05 RPM
SRP007412_cerebellum 24 .32 RPM
SRP007412_heart 25 .62 RPM
SRP007412_kidney 25 .33 RPM
SRP007412_liver 23 .38 RPM
SRP007412_testis 51 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000014379 ortholog_one2one 2 retrogenes
retro_cfam_1843, retro_cfam_312,
Echinops telfairi ENSETEG00000008374 ortholog_one2many 1 retrogene
retro_etel_21,
Felis catus ENSFCAG00000029083 ortholog_one2one 1 retrogene
retro_fcat_787,
Homo sapiens ENSG00000161654 ortholog_one2one 1 retrogene
retro_hsap_4041,
Loxodonta africana ENSLAFG00000005202 ortholog_one2one 1 retrogene
retro_lafr_906,
Macropus eugenii ENSMEUG00000007501 ortholog_one2one 1 retrogene
retro_meug_1462,
Macaca mulatta ENSMMUG00000006804 ortholog_one2one 1 retrogene
retro_mmul_3,
Otolemur garnettii ENSOGAG00000010489 ortholog_one2one 2 retrogenes
retro_ogar_1771, retro_ogar_2447,
Oryzias latipes ENSORLG00000011310 ortholog_one2many 1 retrogene
retro_olat_12,
Rattus norvegicus ENSRNOG00000020894 ortholog_one2one 1 retrogene
retro_rnor_2845,
Tupaia belangeri ENSTBEG00000012523 ortholog_one2many 2 retrogenes
retro_tbel_3062, retro_tbel_60,
Vicugna pacos ENSVPAG00000011145 ortholog_one2one 1 retrogene
retro_vpac_627,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2683 98.37 94.36
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Download FASTA sequences of all ENSMUSG00000020922 retrocopies