Parental gene:

Snrnp27, ENSMUSG00000001158

Aliases:Snrnp27, 2610209M04Rik, AI449063, AU022368, Ry1
Description:small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:MGI Symbol;Acc:MGI:1913868]
Organism:Mouse (Mus musculus)
Coordinates:6:86675220..86684522(-)


>ENSMUSG00000001158
ATGGGTCGAAGTCGTAGCCGCTCCCCGCGTAGGGAACGTAGGCGGTCCCGGTCCACATCTCGGGATCGAGAAAGAAGACG
CCGAGAAAGGTCCAGGTCCAGGGAGAGAGATCGCAGAAGGAGCCGCTCAAGATCTCCACACCGAAGACGCTCCAGGTCTC
CAAGACGACATAGATCCACATCTCCCTCCCCTTCTCGACTGAAAGAAAGAAGAGATGAGGAAAAGAAAGAAACTAAAGAA
ATAAAGAACAAAGAACGGCAGATCACTGAGGAAGACCTGGAGGGTAAAACAGAGGAAGAAATAGAAATGATGAAATTAAT
GGGATTTGCCTCTTTTGACTCCACAAAAGGGAAGAAGGTAGACGGCTCTGTAAATGCCTATGCCATCAACGTGTCTCAAA
AGAGGAAGTACAGGCAGTACATGAATCGAAAAGGCGGATTCAACAGACCTCTGGATTTTATTGCATGA

Library Parental gene expression (RPM)
SRP007412_brain 16 .21 RPM
SRP007412_cerebellum 20 .93 RPM
SRP007412_heart 15 .44 RPM
SRP007412_kidney 18 .88 RPM
SRP007412_liver 7 .59 RPM
SRP007412_testis 21 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000037746 ortholog_one2one 4 retrogenes
retro_btau_1352, retro_btau_375, retro_btau_514, retro_btau_515,
Choloepus hoffmanni ENSCHOG00000003042 ortholog_one2one 1 retrogene
retro_chof_2589,
Echinops telfairi ENSETEG00000017344 ortholog_one2one 1 retrogene
retro_etel_655,
Homo sapiens ENSG00000124380 ortholog_one2one 1 retrogene
retro_hsap_3387,
Oryctolagus cuniculus ENSOCUG00000022967 ortholog_one2one 1 retrogene
retro_ocun_1281,
Pongo abelii ENSPPYG00000012332 ortholog_one2one 2 retrogenes
retro_pabe_1990, retro_pabe_2782,
Pan troglodytes ENSPTRG00000012022 ortholog_one2one 1 retrogene
retro_ptro_2300,
Sus scrofa ENSSSCG00000025674 ortholog_one2one 1 retrogene
retro_sscr_285,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1977 54.88 50.97
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2. retro_mmus_2105 66.91 87.10
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Download FASTA sequences of all ENSMUSG00000001158 retrocopies