Parental gene:

ENSMODG00000017334

Aliases:None
Description:Ribose-phosphate pyrophosphokinase [Source:UniProtKB/TrEMBL;Acc:F6WVR9]
Organism:Opossum (Monodelphis domestica)
Coordinates:7:28574169..28608336(-)


>ENSMODG00000017334
ATGCCCAACATCGTGCTGTTCAGCGGCAGCTCGCACCAGGACCTGTCCCAGAAAGTGGCGGACAGATTGGGACTGGAACT
GGGCAAGGTAGTCACTAAGAAATTCAGCAATCAGGAGACCAGTGTAGAAATCGGTGAAAGTGTGAGAGGGGAAGATGTCT
ACATTATCCAAAGTGGCTGTGGGGAAATTAATGATAACTTGATGGAACTTCTCATTATGATCAATGCTTGCAAAATTGCA
TCATCATCCAGGGTGACTGCAGTGATCCCATGTTTTCCATATGCCCGACAAGATAAAAAAGACAAGAGTCGTGCTCCAAT
TTCTGCAAAACTTGTGGCTAATATGCTTTCCGTGGCTGGGGCTGATCATATCATTACAATGGATCTCCATGCTTCTCAGA
TACAGGGATTTTTTGATATTCCAGTGGATAATTTGTATGCAGAACCTGCAGTCTTACAGTGGATTCGAGAAAATATTGCA
GAATGGAGGAATTGTATCATTGTGTCTCCAGATGCTGGTGGAGCTAAAAGAGTGACATCAATTGCTGACAGACTGAATGT
GGAGTTTGCTTTGATTCATAAAGAAAGAAAGAAGGCAAATGAAGTAGACAGGATGGTTTTGGTTGGTGACGTGAAGGATC
GTGTAGCCATCCTTGTGGATGACATGGCTGATACATGTGGCACAATATGCCATGCTGCAGACAAGTTACTGTCTGCTGGA
GCCACCAAAGTTTATGCAATTCTGACTCATGGAATCTTCTCTGGGCCAGCTATTTCTAGGATTAATAATGCGGCATTTGA
GGCTGTGGTGGTCACAAATACAATTCCACAAGAAGACAAAATGAAGCACTGCTCTAAAATCCAGGTTATTGACATTTCAA
TGATACTGGCTGAAGCAATACGGAGAACACACAATGGTGAATCTGTATCTTATCTGTTCAGTCATGTTCCACTATAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000011662 possible_ortholog 2 retrogenes
retro_cfam_1037, retro_cfam_1433,
Callithrix jacchus ENSCJAG00000003885 possible_ortholog 1 retrogene
retro_cjac_364,
Cavia porcellus ENSCPOG00000007206 possible_ortholog 1 retrogene
retro_cpor_16,
Dipodomys ordii ENSDORG00000007577 possible_ortholog 2 retrogenes
retro_dord_223, retro_dord_605,
Echinops telfairi ENSETEG00000005166 possible_ortholog 2 retrogenes
retro_etel_1613, retro_etel_669,
Felis catus ENSFCAG00000026323 possible_ortholog 1 retrogene
retro_fcat_527,
Monodelphis domestica ENSMODG00000009171 within_species_paralog 1 retrogene
retro_mdom_1440,
Otolemur garnettii ENSOGAG00000016087 possible_ortholog 1 retrogene
retro_ogar_1440,
Procavia capensis ENSPCAG00000001197 possible_ortholog 2 retrogenes
retro_pcap_219, retro_pcap_292,
Pongo abelii ENSPPYG00000020125 possible_ortholog 1 retrogene
retro_pabe_3431,
Pteropus vampyrus ENSPVAG00000009452 possible_ortholog 1 retrogene
retro_pvam_1224,
Sorex araneus ENSSARG00000007710 possible_ortholog 1 retrogene
retro_sara_18,
Ictidomys tridecemlineatus ENSSTOG00000006056 possible_ortholog 1 retrogene
retro_itri_1668,
Tupaia belangeri ENSTBEG00000009917 possible_ortholog 1 retrogene
retro_tbel_1245,
Tursiops truncatus ENSTTRG00000003226 possible_ortholog 1 retrogene
retro_ttru_1494,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_258 93.71 100.00
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2. retro_mdom_834 99.06 100.00
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3. retro_mdom_1323 88.40 100.00
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4. retro_mdom_1359 95.60 100.00
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Download FASTA sequences of all ENSMODG00000017334 retrocopies